HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:548.5 nTPM
HPA Brain:409.3 nTPM
GTEx:548.5 nTPM
FANTOM5:432.8 Scaled Tags Per Million
Pig:104.2 nTPM
Mouse:148.7 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006757
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 409.3
Sample id Sample description nTPM
Hippocampus
nTPM: 401.3
1911 Female, age 85, right hemisphere 451.3
1898 Male, age 80, left hemisphere 432.6
2529 Female, age 94, left hemisphere 416.5
2148 Female, age 91, left hemisphere 376.7
2621 Female, age 67, right hemisphere 368.0
1855 Male, age 76, left hemisphere 362.6
Dentate gyrus
nTPM: 349.2
2530 Female, age 94, left hemisphere 490.3
2528 Male, age 74, both hemispheres 474.9
2246 Female, age 85, both hemispheres 322.1
2010 Male, age 76, both hemispheres 281.9
2531 Female, age 67, both hemispheres 266.4
1927 Female, age 91, both hemispheres 259.8
Entorhinal gyrus
nTPM: 368.9
2117 Female, age 91, right hemisphere 577.5
2764 Male, age 80, right hemisphere 388.4
1938 Female, age 85, left hemisphere 335.3
1787 Male, age 76, left hemisphere 315.7
2686 Male, age 75, right hemisphere 314.3
2613 Female, age 94, left hemisphere 282.3
Hippocampus, CA1
nTPM: 322.6
2527 Male, age 74, both hemispheres 436.2
1873 Female, age 85, both hemispheres 407.6
2082 Female, age 91, right hemisphere 294.1
2749 Male, age 80, left hemisphere 241.6
2045 Male, age 76, both hemispheres 233.3
Hippocampus, CA2
nTPM: 349.5
1963 Male, age 80, left hemisphere 416.5
2249 Male, age 74, both hemispheres 415.2
1940 Female, age 85, left hemisphere 374.3
2437 Female, age 94, left hemisphere 362.8
2113 Female, age 91, right hemisphere 319.9
1892 Male, age 76, both hemispheres 208.6
Hippocampus, CA3
nTPM: 320.4
1891 Female, age 85, both hemispheres 432.2
2861 Female, age 67, both hemispheres 361.3
2620 Female, age 94, left hemisphere 308.5
2436 Male, age 74, both hemispheres 299.7
1867 Male, age 76, both hemispheres 286.5
2137 Male, age 80, left hemisphere 234.5
Parahippocampal cortex
nTPM: 301.2
2692 Male, age 74, both hemispheres 440.0
2622 Female, age 67, right hemisphere 331.4
1933 Female, age 85, both hemispheres 318.8
1990 Female, age 91, right hemisphere 298.0
2018 Male, age 76, both hemispheres 285.9
2532 Female, age 72, left hemisphere 283.6
1850 Male, age 80, both hemispheres 279.0
2245 Female, age 91, both hemispheres 275.8
2250 Female, age 67, right hemisphere 267.8
2693 Female, age 94, both hemispheres 231.7
Perirhinal gyrus
nTPM: 221.6
1794 Male, age 80, right hemisphere 284.9
1847 Female, age 91, left hemisphere 216.4
1841 Female, age 85, right hemisphere 213.6
2521 Female, age 94, right hemisphere 197.0
2848 Male, age 76, right hemisphere 196.3
Subiculum
nTPM: 409.3
2619 Male, age 74, both hemispheres 478.4
2042 Male, age 76, both hemispheres 477.1
1901 Male, age 80, both hemispheres 438.2
2729 Female, age 91, right hemisphere 416.5
1977 Female, age 85, both hemispheres 337.2
2438 Female, age 94, left hemisphere 308.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 548.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 548.5
Samples: 197

Max nTPM: 1225.4
Min nTPM: 155.1
Std nTPM: 196.8
Median nTPM: 543.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1225.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1084.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1065.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 988.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 984.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 962.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 959.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 941.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 916.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 899.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 871.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 432.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 432.8
FF:10153-102I9 76 years, female 508.4
FF:10169-103B7 60 years, female 357.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 104.2
Pig sample Sample description nTPM
Subiculum
nTPM: 74.8
Samples: 4

Max nTPM: 91.4
Min nTPM: 64.9
Sample A Female 91.4
Sample B Female 74.2
Sample C Male 64.9
Sample D Male 68.7
Dorsal hippocampus
nTPM: 104.2
Samples: 4

Max nTPM: 136.8
Min nTPM: 66.4
Sample A Female 136.8
Sample B Female 84.9
Sample C Male 128.8
Sample D Male 66.4
Entorhinal cortex
nTPM: 79.5
Samples: 4

Max nTPM: 94.7
Min nTPM: 69.2
Sample A Female 70.1
Sample B Female 94.7
Sample C Male 83.8
Sample D Male 69.2
Ventral hippocampus
nTPM: 89.2
Samples: 4

Max nTPM: 101.5
Min nTPM: 71.5
Sample A Female 90.3
Sample B Female 71.5
Sample C Male 101.5
Sample D Male 93.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.6
Samples: 4

Max nTPM: 145.8
Min nTPM: 109.4
Sample A Male 145.8
Sample B Male 131.7
Sample C Female 131.4
Sample D Female 109.4
Hippocampal formation
nTPM: 148.7
Samples: 4

Max nTPM: 171.0
Min nTPM: 126.8
Sample A Male 128.2
Sample B Male 126.8
Sample C Female 168.8
Sample D Female 171.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
1465 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 5.0
1464 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 2.2
74581363 Antisense, RP_060215_03_B02, Mouse strain C57BL/6J (56 days, male) 0.1

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