We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
15.2
nTPM
HPA Brain:
22.8
nTPM
GTEx:
15.2
nTPM
FANTOM5:
23.2
Scaled Tags Per Million
Pig:
6.1
nTPM
Mouse:
22.3
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
22.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 20.2
2019
Male, age 18, unknown
23.2
1830
Male, age 51, unknown
22.5
1833
Male, age 53, unknown
22.1
2411
Female, age 72, unknown
22.0
1870
Female, age 42, unknown
21.3
2586
Male, age 75, left hemisphere
21.1
2219
Male, age 76, both hemispheres
20.2
1827
Male, age 72, unknown
17.0
2666
Male, age 74, left hemisphere
16.3
2828
Female, age 72, unknown
16.0
Dorsal raphe nucleus nTPM: 19.4
2750
Male, age 76, both hemispheres
23.4
1828
Male, age 53, unknown
19.7
2298
Female, age 72, unknown
18.7
2047
Male, age 72, unknown
18.0
2016
Female, age 72, unknown
17.2
Inferior colliculus nTPM: 19.9
2097
Female, age 72, unknown
21.3
1848
Female, age 42, unknown
20.1
1890
Male, age 53, unknown
19.4
2849
Male, age 72, unknown
18.6
Median raphe nucleus nTPM: 20.8
2220
Male, age 76, midline
20.8
Periaquaductal grey, anterior nTPM: 22.8
1947
Male, age 18, unknown
26.8
2502
Female, age 75, unknown
22.6
1795
Male, age 51, unknown
18.9
Periaquaductal grey, dorsal nTPM: 18.1
2464
Female, age 72, unknown
20.9
1831
Male, age 72, unknown
19.1
1840
Male, age 53, unknown
16.9
2850
Male, age 76, both hemispheres
15.7
Periaquaductal grey, lateral nTPM: 18.9
2272
Male, age 74, both hemispheres
20.7
2053
Male, age 18, unknown
20.1
2140
Male, age 76, both hemispheres
15.8
Pretectal area nTPM: 20.6
1815
Male, age 53, unknown
22.4
2316
Male, age 76, right hemisphere
22.4
1816
Male, age 51, unknown
21.8
1817
Female, age 42, unknown
21.8
2007
Male, age 72, unknown
21.4
2224
Female, age 72, unknown
21.2
1944
Female, age 72, unknown
20.5
2825
Male, age 18, unknown
20.3
2273
Male, age 74, both hemispheres
19.5
2667
Female, age 75, unknown
18.6
2407
Male, age 75, both hemispheres
16.9
Red nucleus nTPM: 22.7
2503
Female, age 72, unknown
27.2
1954
Female, age 42, unknown
25.4
1821
Female, age 72, unknown
24.5
1904
Male, age 53, unknown
23.8
2823
Male, age 76, right hemisphere
23.1
1865
Male, age 51, unknown
22.0
2769
Male, age 72, unknown
21.8
2785
Male, age 18, unknown
21.7
2588
Male, age 74, left hemisphere
21.3
2227
Male, age 72, unknown
21.1
2725
Female, age 75, unknown
20.5
2584
Male, age 75, left hemisphere
20.4
Substantia nigra nTPM: 22.1
2241
Male, age 72, unknown
34.3
2590
Female, age 75, unknown
23.6
2409
Female, age 72, unknown
22.2
1851
Male, age 51, unknown
22.0
1889
Female, age 72, unknown
22.0
1916
Female, age 42, unknown
21.6
2583
Male, age 75, right hemisphere
20.2
2699
Male, age 18, unknown
19.1
1941
Male, age 53, unknown
18.0
2665
Male, age 74, both hemispheres
17.7
Superior colliculus nTPM: 19.7
2587
Male, age 74, left hemisphere
23.1
2668
Female, age 75, unknown
22.0
1913
Female, age 42, unknown
21.5
1796
Male, age 53, unknown
21.0
1895
Male, age 76, right hemisphere
20.1
1839
Male, age 51, unknown
19.9
2087
Female, age 72, unknown
19.3
2664
Male, age 75, both hemispheres
17.7
1995
Male, age 72, unknown
16.7
2261
Male, age 18, unknown
15.9
Ventral tegmental area nTPM: 20.2
2410
Female, age 72, unknown
21.8
2218
Male, age 76, both hemispheres
21.3
2223
Female, age 72, unknown
20.7
1942
Male, age 51, unknown
20.1
2021
Male, age 53, unknown
19.2
1915
Female, age 42, unknown
18.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
15.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 15.2
Samples: 139
Max nTPM: 26.7
Min nTPM: 7.7
Std nTPM: 3.6
Median nTPM: 14.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
26.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
25.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
25.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
23.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
23.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
23.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
22.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
22.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
21.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
20.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
20.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
20.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
20.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
20.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
20.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
19.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
19.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
19.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
19.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
19.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
19.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
18.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
18.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
18.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
18.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
18.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
18.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
18.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
17.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
17.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
17.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
17.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
17.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
17.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
17.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
17.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
17.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
16.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
16.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
16.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
16.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
16.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
16.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
16.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
16.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
16.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
16.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
16.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
16.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
16.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
15.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
15.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
15.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
15.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
15.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
15.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
15.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
15.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
15.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
15.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
15.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
15.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
15.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
15.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
14.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
14.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
14.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
14.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
14.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
14.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
14.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
14.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
14.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
14.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
14.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
14.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
14.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
14.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
14.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
14.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
14.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
14.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
14.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
13.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
13.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
13.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
13.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
13.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
13.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
13.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
13.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
13.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
13.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
13.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
13.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
13.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
13.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
13.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
13.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
12.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
12.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
12.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
12.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
12.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
12.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
12.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
12.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
12.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
12.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
12.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
12.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
12.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
12.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
12.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
12.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
11.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
11.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
11.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
11.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
11.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
11.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
11.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
11.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
11.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
10.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
10.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
10.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
10.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
10.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
10.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
10.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
10.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
10.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
10.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
10.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
9.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
9.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
8.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
7.7
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
22.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 22.3
Samples: 4
Max nTPM: 23.2
Min nTPM: 21.6
Sample A
Male
22.5
Sample B
Male
21.9
Sample C
Female
23.2
Sample D
Female
21.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.