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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.9
nTPM
Monaco:
176.6
nTPM
Schmiedel:
65.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.9
HPA sample
nTPM
gdT-cell nTPM: 32.5
Samples: 6
Max nTPM: 52.0
Min nTPM: 25.4
P10809_1007
27.1
P10809_1022
52.0
P10809_1041
32.1
P10809_1060
25.4
P10809_1077
25.7
P10809_1098
32.8
MAIT T-cell nTPM: 19.5
Samples: 6
Max nTPM: 25.7
Min nTPM: 13.3
P10809_1006
13.3
P10809_1024
25.7
P10809_1043
24.1
P10809_1062
15.0
P10809_1083
23.6
P10809_1097
15.3
Memory CD4 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 36.9
Min nTPM: 24.6
P10809_1014
24.6
P10809_1026
29.4
P10809_1045
30.8
P10809_1064
29.8
P10809_1086
36.9
P10809_1113
35.6
Memory CD8 T-cell nTPM: 33.9
Samples: 5
Max nTPM: 45.2
Min nTPM: 26.6
P10809_1012
34.4
P10809_1027
26.6
P10809_1046
35.4
P10809_1065
28.0
P10809_1111
45.2
Naive CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 61.8
Min nTPM: 41.4
P10809_1015
48.2
P10809_1030
41.4
P10809_1049
61.8
P10809_1068
44.7
P10809_1085
45.8
P10809_1112
45.3
Naive CD8 T-cell nTPM: 39.4
Samples: 6
Max nTPM: 53.1
Min nTPM: 25.8
P10809_1016
50.7
P10809_1031
38.9
P10809_1050
37.5
P10809_1069
30.1
P10809_1087
25.8
P10809_1110
53.1
T-reg nTPM: 46.6
Samples: 6
Max nTPM: 65.0
Min nTPM: 38.5
P10809_1018
47.3
P10809_1037
41.4
P10809_1056
38.5
P10809_1075
43.6
P10809_1094
65.0
P10809_1106
43.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
176.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.9
Samples: 4
Max nTPM: 116.5
Min nTPM: 89.6
RHH5202_R3573
97.9
RHH5230_R3602
107.6
RHH5259_R3631
89.6
RHH5288_R3660
116.5
Effector memory CD8 T-cell nTPM: 116.5
Samples: 4
Max nTPM: 144.5
Min nTPM: 95.5
RHH5203_R3574
95.5
RHH5231_R3603
118.5
RHH5260_R3632
107.6
RHH5289_R3661
144.5
MAIT T-cell nTPM: 49.1
Samples: 4
Max nTPM: 59.0
Min nTPM: 41.8
RHH5233_R3605
59.0
RHH5205_R3576
41.8
RHH5262_R3634
51.2
RHH5297_R3663
44.4
Memory CD4 T-cell TFH nTPM: 113.2
Samples: 4
Max nTPM: 137.1
Min nTPM: 100.7
RHH5300_R3666
100.7
RHH5236_R3608
102.8
RHH5265_R3637
112.0
RHH5208_R3579
137.1
Memory CD4 T-cell Th1 nTPM: 117.9
Samples: 4
Max nTPM: 124.9
Min nTPM: 110.4
RHH5210_R3581
124.9
RHH5302_R3668
121.3
RHH5238_R3610
114.9
RHH5267_R3639
110.4
Memory CD4 T-cell Th1/Th17 nTPM: 92.9
Samples: 4
Max nTPM: 105.6
Min nTPM: 77.5
RHH5303_R3669
92.7
RHH5211_R3582
77.5
RHH5239_R3611
105.6
RHH5268_R3640
95.7
Memory CD4 T-cell Th17 nTPM: 99.1
Samples: 4
Max nTPM: 118.6
Min nTPM: 82.3
RHH5304_R3670
98.7
RHH5212_R3583
82.3
RHH5240_R3612
118.6
RHH5269_R3641
96.7
Memory CD4 T-cell Th2 nTPM: 120.6
Samples: 4
Max nTPM: 140.4
Min nTPM: 112.2
RHH5305_R3671
140.4
RHH5213_R3584
112.6
RHH5241_R3613
112.2
RHH5270_R3642
117.0
Naive CD4 T-cell nTPM: 176.6
Samples: 4
Max nTPM: 205.1
Min nTPM: 139.2
RHH5306_R3672
177.5
RHH5214_R3585
139.2
RHH5242_R3614
184.6
RHH5271_R3643
205.1
Naive CD8 T-cell nTPM: 175.3
Samples: 4
Max nTPM: 203.6
Min nTPM: 159.9
RHH5201_R3572
175.4
RHH5229_R3601
203.6
RHH5258_R3630
159.9
RHH5287_R3659
162.2
Non-Vd2 gdTCR nTPM: 69.0
Samples: 4
Max nTPM: 74.2
Min nTPM: 61.0
RHH5235_R3607
74.2
RHH5264_R3636
68.2
RHH5207_R3578
72.4
RHH5299_R3665
61.0
T-reg nTPM: 121.6
Samples: 4
Max nTPM: 134.1
Min nTPM: 96.0
RHH5301_R3667
134.1
RHH5237_R3609
128.9
RHH5266_R3638
127.3
RHH5209_R3580
96.0
Terminal effector memory CD4 T-cell nTPM: 113.9
Samples: 2
Max nTPM: 128.7
Min nTPM: 99.1
RHH5243_R3615
99.1
RHH5272_R3644
128.7
Terminal effector memory CD8 T-cell nTPM: 80.2
Samples: 4
Max nTPM: 91.3
Min nTPM: 63.4
RHH5232_R3604
91.3
RHH5204_R3575
63.4
RHH5261_R3633
87.1
RHH5296_R3662
78.8
Vd2 gdTCR nTPM: 105.7
Samples: 4
Max nTPM: 140.8
Min nTPM: 68.3
RHH5234_R3606
131.4
RHH5206_R3577
68.3
RHH5263_R3635
140.8
RHH5298_R3664
82.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
