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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.9
nTPM
Monaco:
244.2
nTPM
Schmiedel:
265.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.9
HPA sample
nTPM
gdT-cell nTPM: 63.9
Samples: 6
Max nTPM: 78.1
Min nTPM: 45.8
P10809_1007
45.8
P10809_1022
78.1
P10809_1041
71.3
P10809_1060
53.7
P10809_1077
69.7
P10809_1098
64.8
MAIT T-cell nTPM: 49.7
Samples: 6
Max nTPM: 60.2
Min nTPM: 40.8
P10809_1006
45.3
P10809_1024
60.2
P10809_1043
47.2
P10809_1062
40.8
P10809_1083
54.8
P10809_1097
49.6
Memory CD4 T-cell nTPM: 44.6
Samples: 6
Max nTPM: 57.5
Min nTPM: 31.9
P10809_1014
31.9
P10809_1026
38.0
P10809_1045
47.8
P10809_1064
50.5
P10809_1086
57.5
P10809_1113
41.6
Memory CD8 T-cell nTPM: 58.3
Samples: 5
Max nTPM: 65.9
Min nTPM: 44.9
P10809_1012
44.9
P10809_1027
65.9
P10809_1046
53.9
P10809_1065
61.9
P10809_1111
64.9
Naive CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 63.2
Min nTPM: 35.7
P10809_1015
35.7
P10809_1030
47.1
P10809_1049
60.1
P10809_1068
51.8
P10809_1085
63.2
P10809_1112
46.5
Naive CD8 T-cell nTPM: 61.7
Samples: 6
Max nTPM: 81.4
Min nTPM: 38.2
P10809_1016
38.2
P10809_1031
63.6
P10809_1050
59.7
P10809_1069
76.6
P10809_1087
81.4
P10809_1110
50.8
T-reg nTPM: 53.0
Samples: 6
Max nTPM: 63.2
Min nTPM: 47.3
P10809_1018
47.3
P10809_1037
53.4
P10809_1056
63.2
P10809_1075
49.2
P10809_1094
56.3
P10809_1106
48.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
244.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.0
Samples: 4
Max nTPM: 150.2
Min nTPM: 100.4
RHH5202_R3573
150.2
RHH5230_R3602
107.9
RHH5259_R3631
125.5
RHH5288_R3660
100.4
Effector memory CD8 T-cell nTPM: 161.0
Samples: 4
Max nTPM: 185.7
Min nTPM: 148.7
RHH5203_R3574
150.5
RHH5231_R3603
148.7
RHH5260_R3632
185.7
RHH5289_R3661
159.2
MAIT T-cell nTPM: 129.6
Samples: 4
Max nTPM: 165.1
Min nTPM: 96.4
RHH5233_R3605
117.3
RHH5205_R3576
165.1
RHH5262_R3634
139.5
RHH5297_R3663
96.4
Memory CD4 T-cell TFH nTPM: 119.4
Samples: 4
Max nTPM: 140.0
Min nTPM: 98.0
RHH5300_R3666
98.0
RHH5236_R3608
113.7
RHH5265_R3637
140.0
RHH5208_R3579
125.7
Memory CD4 T-cell Th1 nTPM: 109.5
Samples: 4
Max nTPM: 123.8
Min nTPM: 88.3
RHH5210_R3581
116.6
RHH5302_R3668
109.3
RHH5238_R3610
88.3
RHH5267_R3639
123.8
Memory CD4 T-cell Th1/Th17 nTPM: 119.4
Samples: 4
Max nTPM: 141.1
Min nTPM: 92.2
RHH5303_R3669
92.2
RHH5211_R3582
141.1
RHH5239_R3611
128.7
RHH5268_R3640
115.6
Memory CD4 T-cell Th17 nTPM: 98.5
Samples: 4
Max nTPM: 117.6
Min nTPM: 89.3
RHH5304_R3670
117.6
RHH5212_R3583
89.3
RHH5240_R3612
90.4
RHH5269_R3641
96.7
Memory CD4 T-cell Th2 nTPM: 90.3
Samples: 4
Max nTPM: 101.1
Min nTPM: 70.3
RHH5305_R3671
101.1
RHH5213_R3584
99.8
RHH5241_R3613
89.8
RHH5270_R3642
70.3
Naive CD4 T-cell nTPM: 128.3
Samples: 4
Max nTPM: 135.9
Min nTPM: 116.9
RHH5306_R3672
116.9
RHH5214_R3585
131.6
RHH5242_R3614
128.9
RHH5271_R3643
135.9
Naive CD8 T-cell nTPM: 142.6
Samples: 4
Max nTPM: 155.6
Min nTPM: 126.1
RHH5201_R3572
155.6
RHH5229_R3601
148.2
RHH5258_R3630
140.6
RHH5287_R3659
126.1
Non-Vd2 gdTCR nTPM: 244.2
Samples: 4
Max nTPM: 312.0
Min nTPM: 201.6
RHH5235_R3607
219.9
RHH5264_R3636
243.1
RHH5207_R3578
312.0
RHH5299_R3665
201.6
T-reg nTPM: 91.0
Samples: 4
Max nTPM: 114.5
Min nTPM: 70.4
RHH5301_R3667
70.4
RHH5237_R3609
114.5
RHH5266_R3638
91.9
RHH5209_R3580
87.1
Terminal effector memory CD4 T-cell nTPM: 158.9
Samples: 2
Max nTPM: 168.9
Min nTPM: 148.9
RHH5243_R3615
148.9
RHH5272_R3644
168.9
Terminal effector memory CD8 T-cell nTPM: 194.5
Samples: 4
Max nTPM: 237.1
Min nTPM: 172.9
RHH5232_R3604
189.8
RHH5204_R3575
178.1
RHH5261_R3633
237.1
RHH5296_R3662
172.9
Vd2 gdTCR nTPM: 154.0
Samples: 4
Max nTPM: 223.6
Min nTPM: 106.5
RHH5234_R3606
124.9
RHH5206_R3577
223.6
RHH5263_R3635
161.1
RHH5298_R3664
106.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
