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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
168.3
nTPM
Monaco:
342.5
nTPM
Schmiedel:
242.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.3
HPA sample
nTPM
gdT-cell nTPM: 168.3
Samples: 6
Max nTPM: 234.5
Min nTPM: 114.9
P10809_1007
147.9
P10809_1022
206.0
P10809_1041
234.5
P10809_1060
132.0
P10809_1077
174.5
P10809_1098
114.9
MAIT T-cell nTPM: 152.2
Samples: 6
Max nTPM: 191.9
Min nTPM: 132.5
P10809_1006
132.5
P10809_1024
182.7
P10809_1043
191.9
P10809_1062
136.9
P10809_1083
134.6
P10809_1097
134.7
Memory CD4 T-cell nTPM: 89.3
Samples: 6
Max nTPM: 121.8
Min nTPM: 74.9
P10809_1014
74.9
P10809_1026
76.0
P10809_1045
81.1
P10809_1064
102.8
P10809_1086
121.8
P10809_1113
78.9
Memory CD8 T-cell nTPM: 130.1
Samples: 5
Max nTPM: 167.6
Min nTPM: 83.3
P10809_1012
105.4
P10809_1027
167.6
P10809_1046
150.0
P10809_1065
144.3
P10809_1111
83.3
Naive CD4 T-cell nTPM: 75.5
Samples: 6
Max nTPM: 80.1
Min nTPM: 68.7
P10809_1015
78.5
P10809_1030
76.0
P10809_1049
77.4
P10809_1068
68.7
P10809_1085
80.1
P10809_1112
72.3
Naive CD8 T-cell nTPM: 104.9
Samples: 6
Max nTPM: 150.3
Min nTPM: 65.9
P10809_1016
78.7
P10809_1031
93.7
P10809_1050
116.3
P10809_1069
124.7
P10809_1087
150.3
P10809_1110
65.9
T-reg nTPM: 82.2
Samples: 6
Max nTPM: 98.9
Min nTPM: 61.9
P10809_1018
61.9
P10809_1037
93.5
P10809_1056
98.9
P10809_1075
75.7
P10809_1094
95.5
P10809_1106
67.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
342.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 174.5
Samples: 4
Max nTPM: 222.8
Min nTPM: 130.6
RHH5202_R3573
222.8
RHH5230_R3602
176.5
RHH5259_R3631
130.6
RHH5288_R3660
167.9
Effector memory CD8 T-cell nTPM: 276.8
Samples: 4
Max nTPM: 439.2
Min nTPM: 157.2
RHH5203_R3574
322.6
RHH5231_R3603
157.2
RHH5260_R3632
188.2
RHH5289_R3661
439.2
MAIT T-cell nTPM: 309.2
Samples: 4
Max nTPM: 340.0
Min nTPM: 262.9
RHH5233_R3605
340.0
RHH5205_R3576
317.1
RHH5262_R3634
262.9
RHH5297_R3663
316.7
Memory CD4 T-cell TFH nTPM: 166.2
Samples: 4
Max nTPM: 222.5
Min nTPM: 138.7
RHH5300_R3666
159.1
RHH5236_R3608
222.5
RHH5265_R3637
144.5
RHH5208_R3579
138.7
Memory CD4 T-cell Th1 nTPM: 139.9
Samples: 4
Max nTPM: 175.5
Min nTPM: 104.4
RHH5210_R3581
124.9
RHH5302_R3668
175.5
RHH5238_R3610
104.4
RHH5267_R3639
154.6
Memory CD4 T-cell Th1/Th17 nTPM: 186.7
Samples: 4
Max nTPM: 298.7
Min nTPM: 139.0
RHH5303_R3669
298.7
RHH5211_R3582
140.9
RHH5239_R3611
139.0
RHH5268_R3640
168.2
Memory CD4 T-cell Th17 nTPM: 176.3
Samples: 4
Max nTPM: 255.3
Min nTPM: 104.3
RHH5304_R3670
255.3
RHH5212_R3583
104.3
RHH5240_R3612
169.4
RHH5269_R3641
176.2
Memory CD4 T-cell Th2 nTPM: 215.9
Samples: 4
Max nTPM: 239.5
Min nTPM: 194.5
RHH5305_R3671
194.5
RHH5213_R3584
227.4
RHH5241_R3613
202.1
RHH5270_R3642
239.5
Naive CD4 T-cell nTPM: 140.8
Samples: 4
Max nTPM: 176.2
Min nTPM: 93.2
RHH5306_R3672
176.2
RHH5214_R3585
153.8
RHH5242_R3614
139.8
RHH5271_R3643
93.2
Naive CD8 T-cell nTPM: 84.9
Samples: 4
Max nTPM: 117.2
Min nTPM: 21.5
RHH5201_R3572
117.2
RHH5229_R3601
21.5
RHH5258_R3630
112.0
RHH5287_R3659
88.7
Non-Vd2 gdTCR nTPM: 285.2
Samples: 4
Max nTPM: 405.8
Min nTPM: 134.8
RHH5235_R3607
213.6
RHH5264_R3636
134.8
RHH5207_R3578
405.8
RHH5299_R3665
386.5
T-reg nTPM: 183.5
Samples: 4
Max nTPM: 245.0
Min nTPM: 138.7
RHH5301_R3667
182.9
RHH5237_R3609
245.0
RHH5266_R3638
138.7
RHH5209_R3580
167.2
Terminal effector memory CD4 T-cell nTPM: 213.7
Samples: 2
Max nTPM: 223.9
Min nTPM: 203.4
RHH5243_R3615
223.9
RHH5272_R3644
203.4
Terminal effector memory CD8 T-cell nTPM: 342.5
Samples: 4
Max nTPM: 463.6
Min nTPM: 218.9
RHH5232_R3604
346.1
RHH5204_R3575
341.5
RHH5261_R3633
218.9
RHH5296_R3662
463.6
Vd2 gdTCR nTPM: 279.3
Samples: 4
Max nTPM: 339.3
Min nTPM: 222.6
RHH5234_R3606
339.3
RHH5206_R3577
285.9
RHH5263_R3635
222.6
RHH5298_R3664
269.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
