HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.4 nTPM
HPA Brain:64.8 nTPM
GTEx:25.4 nTPM
FANTOM5:181.5 Scaled Tags Per Million
Pig:67.2 nTPM
Mouse:31.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019863
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.8
Sample id Sample description nTPM
Hippocampus
nTPM: 47.3
1898 Male, age 80, left hemisphere 65.3
1855 Male, age 76, left hemisphere 51.8
1911 Female, age 85, right hemisphere 45.2
2529 Female, age 94, left hemisphere 44.0
2148 Female, age 91, left hemisphere 38.9
2621 Female, age 67, right hemisphere 38.6
Dentate gyrus
nTPM: 48.3
1927 Female, age 91, both hemispheres 61.7
2010 Male, age 76, both hemispheres 55.3
2528 Male, age 74, both hemispheres 51.2
2246 Female, age 85, both hemispheres 45.4
2530 Female, age 94, left hemisphere 42.0
2531 Female, age 67, both hemispheres 34.1
Entorhinal gyrus
nTPM: 46.3
1938 Female, age 85, left hemisphere 57.5
2764 Male, age 80, right hemisphere 52.5
1787 Male, age 76, left hemisphere 49.3
2117 Female, age 91, right hemisphere 44.1
2613 Female, age 94, left hemisphere 39.6
2686 Male, age 75, right hemisphere 34.4
Hippocampus, CA1
nTPM: 55.1
2749 Male, age 80, left hemisphere 72.0
1873 Female, age 85, both hemispheres 60.6
2527 Male, age 74, both hemispheres 50.8
2045 Male, age 76, both hemispheres 49.5
2082 Female, age 91, right hemisphere 42.7
Hippocampus, CA2
nTPM: 49.1
1892 Male, age 76, both hemispheres 61.5
2249 Male, age 74, both hemispheres 56.8
1963 Male, age 80, left hemisphere 54.2
1940 Female, age 85, left hemisphere 44.4
2113 Female, age 91, right hemisphere 41.2
2437 Female, age 94, left hemisphere 36.3
Hippocampus, CA3
nTPM: 47.4
2137 Male, age 80, left hemisphere 60.8
1867 Male, age 76, both hemispheres 56.0
2436 Male, age 74, both hemispheres 48.0
1891 Female, age 85, both hemispheres 47.4
2620 Female, age 94, left hemisphere 39.1
2861 Female, age 67, both hemispheres 33.0
Parahippocampal cortex
nTPM: 48.9
1850 Male, age 80, both hemispheres 65.2
1990 Female, age 91, right hemisphere 56.6
1933 Female, age 85, both hemispheres 55.1
2018 Male, age 76, both hemispheres 50.3
2250 Female, age 67, right hemisphere 49.0
2693 Female, age 94, both hemispheres 49.0
2245 Female, age 91, both hemispheres 46.3
2532 Female, age 72, left hemisphere 43.5
2692 Male, age 74, both hemispheres 42.8
2622 Female, age 67, right hemisphere 30.7
Perirhinal gyrus
nTPM: 64.8
1847 Female, age 91, left hemisphere 76.4
1794 Male, age 80, right hemisphere 70.0
1841 Female, age 85, right hemisphere 66.8
2521 Female, age 94, right hemisphere 55.9
2848 Male, age 76, right hemisphere 55.0
Subiculum
nTPM: 43.8
1977 Female, age 85, both hemispheres 55.5
1901 Male, age 80, both hemispheres 52.1
2042 Male, age 76, both hemispheres 43.1
2729 Female, age 91, right hemisphere 41.2
2438 Female, age 94, left hemisphere 35.9
2619 Male, age 74, both hemispheres 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 44.1
Min nTPM: 13.5
Std nTPM: 5.8
Median nTPM: 24.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 40.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 39.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 39.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 38.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 37.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 37.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 35.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.5
FF:10169-103B7 60 years, female 239.9
FF:10153-102I9 76 years, female 123.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.2
Pig sample Sample description nTPM
Subiculum
nTPM: 62.4
Samples: 4

Max nTPM: 68.7
Min nTPM: 59.0
Sample A Female 68.7
Sample B Female 61.6
Sample C Male 60.2
Sample D Male 59.0
Dorsal hippocampus
nTPM: 67.2
Samples: 4

Max nTPM: 72.7
Min nTPM: 63.8
Sample A Female 72.7
Sample B Female 66.8
Sample C Male 63.8
Sample D Male 65.4
Entorhinal cortex
nTPM: 61.6
Samples: 4

Max nTPM: 66.4
Min nTPM: 56.7
Sample A Female 56.7
Sample B Female 66.4
Sample C Male 64.1
Sample D Male 59.1
Ventral hippocampus
nTPM: 61.9
Samples: 4

Max nTPM: 63.3
Min nTPM: 60.4
Sample A Female 62.3
Sample B Female 63.3
Sample C Male 61.7
Sample D Male 60.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 27.7
Sample A Male 28.6
Sample B Male 28.1
Sample C Female 27.7
Sample D Female 32.5
Hippocampal formation
nTPM: 31.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 26.4
Sample A Male 30.2
Sample B Male 34.8
Sample C Female 33.4
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
2116 Antisense, RP_Baylor_103267, Mouse strain C57BL/6J (56 days, male) 1.2
2115 Antisense, RP_Baylor_103267, Mouse strain C57BL/6J (56 days, male) 0.8

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