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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.7
nTPM
Monaco:
99.0
nTPM
Schmiedel:
97.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.7
HPA sample
nTPM
gdT-cell nTPM: 61.9
Samples: 6
Max nTPM: 77.6
Min nTPM: 44.4
P10809_1007
44.4
P10809_1022
77.6
P10809_1041
61.7
P10809_1060
57.3
P10809_1077
57.7
P10809_1098
72.5
MAIT T-cell nTPM: 80.7
Samples: 6
Max nTPM: 126.1
Min nTPM: 57.9
P10809_1006
57.9
P10809_1024
87.3
P10809_1043
62.8
P10809_1062
67.6
P10809_1083
82.5
P10809_1097
126.1
Memory CD4 T-cell nTPM: 56.8
Samples: 6
Max nTPM: 68.9
Min nTPM: 34.2
P10809_1014
46.4
P10809_1026
34.2
P10809_1045
62.7
P10809_1064
61.1
P10809_1086
68.9
P10809_1113
67.2
Memory CD8 T-cell nTPM: 56.3
Samples: 5
Max nTPM: 68.4
Min nTPM: 45.4
P10809_1012
45.4
P10809_1027
60.1
P10809_1046
56.3
P10809_1065
51.4
P10809_1111
68.4
Naive CD4 T-cell nTPM: 59.6
Samples: 6
Max nTPM: 70.5
Min nTPM: 42.3
P10809_1015
42.3
P10809_1030
68.9
P10809_1049
66.5
P10809_1068
70.5
P10809_1085
44.9
P10809_1112
64.7
Naive CD8 T-cell nTPM: 59.8
Samples: 6
Max nTPM: 69.4
Min nTPM: 44.3
P10809_1016
44.3
P10809_1031
69.4
P10809_1050
47.2
P10809_1069
60.9
P10809_1087
67.9
P10809_1110
69.3
T-reg nTPM: 61.5
Samples: 6
Max nTPM: 75.9
Min nTPM: 38.3
P10809_1018
38.3
P10809_1037
58.3
P10809_1056
73.3
P10809_1075
57.7
P10809_1094
65.5
P10809_1106
75.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 83.6
Min nTPM: 49.1
RHH5202_R3573
68.3
RHH5230_R3602
73.2
RHH5259_R3631
49.1
RHH5288_R3660
83.6
Effector memory CD8 T-cell nTPM: 81.2
Samples: 4
Max nTPM: 95.9
Min nTPM: 68.9
RHH5203_R3574
82.3
RHH5231_R3603
77.8
RHH5260_R3632
68.9
RHH5289_R3661
95.9
MAIT T-cell nTPM: 83.4
Samples: 4
Max nTPM: 93.5
Min nTPM: 71.3
RHH5233_R3605
77.1
RHH5205_R3576
71.3
RHH5262_R3634
91.6
RHH5297_R3663
93.5
Memory CD4 T-cell TFH nTPM: 76.7
Samples: 4
Max nTPM: 103.0
Min nTPM: 53.3
RHH5300_R3666
53.3
RHH5236_R3608
103.0
RHH5265_R3637
54.5
RHH5208_R3579
95.8
Memory CD4 T-cell Th1 nTPM: 61.5
Samples: 4
Max nTPM: 89.8
Min nTPM: 39.5
RHH5210_R3581
59.9
RHH5302_R3668
89.8
RHH5238_R3610
39.5
RHH5267_R3639
56.9
Memory CD4 T-cell Th1/Th17 nTPM: 74.7
Samples: 4
Max nTPM: 97.6
Min nTPM: 37.4
RHH5303_R3669
97.1
RHH5211_R3582
97.6
RHH5239_R3611
37.4
RHH5268_R3640
66.8
Memory CD4 T-cell Th17 nTPM: 69.9
Samples: 4
Max nTPM: 73.5
Min nTPM: 61.9
RHH5304_R3670
71.9
RHH5212_R3583
73.5
RHH5240_R3612
72.2
RHH5269_R3641
61.9
Memory CD4 T-cell Th2 nTPM: 68.9
Samples: 4
Max nTPM: 74.0
Min nTPM: 65.5
RHH5305_R3671
74.0
RHH5213_R3584
68.1
RHH5241_R3613
67.9
RHH5270_R3642
65.5
Naive CD4 T-cell nTPM: 81.4
Samples: 4
Max nTPM: 89.2
Min nTPM: 68.9
RHH5306_R3672
85.1
RHH5214_R3585
89.2
RHH5242_R3614
82.5
RHH5271_R3643
68.9
Naive CD8 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 95.8
Min nTPM: 45.7
RHH5201_R3572
71.1
RHH5229_R3601
45.7
RHH5258_R3630
95.8
RHH5287_R3659
80.6
Non-Vd2 gdTCR nTPM: 99.0
Samples: 4
Max nTPM: 123.0
Min nTPM: 83.7
RHH5235_R3607
83.7
RHH5264_R3636
123.0
RHH5207_R3578
95.5
RHH5299_R3665
93.7
T-reg nTPM: 75.3
Samples: 4
Max nTPM: 94.2
Min nTPM: 60.0
RHH5301_R3667
68.4
RHH5237_R3609
94.2
RHH5266_R3638
60.0
RHH5209_R3580
78.7
Terminal effector memory CD4 T-cell nTPM: 75.8
Samples: 2
Max nTPM: 78.8
Min nTPM: 72.7
RHH5243_R3615
78.8
RHH5272_R3644
72.7
Terminal effector memory CD8 T-cell nTPM: 97.5
Samples: 4
Max nTPM: 107.7
Min nTPM: 91.4
RHH5232_R3604
93.9
RHH5204_R3575
91.4
RHH5261_R3633
97.1
RHH5296_R3662
107.7
Vd2 gdTCR nTPM: 97.9
Samples: 4
Max nTPM: 127.3
Min nTPM: 60.3
RHH5234_R3606
90.6
RHH5206_R3577
127.3
RHH5263_R3635
113.3
RHH5298_R3664
60.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
