HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:63.7 nTPM
HPA Brain:109.7 nTPM
GTEx:63.7 nTPM
FANTOM5:121.3 Scaled Tags Per Million
Pig:41.3 nTPM
Mouse:44.2 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.7
Sample id Sample description nTPM
Hippocampus
nTPM: 95.9
2529 Female, age 94, left hemisphere 114.4
1911 Female, age 85, right hemisphere 104.9
2621 Female, age 67, right hemisphere 100.9
1898 Male, age 80, left hemisphere 88.3
1855 Male, age 76, left hemisphere 83.5
2148 Female, age 91, left hemisphere 83.5
Dentate gyrus
nTPM: 95.7
2530 Female, age 94, left hemisphere 131.2
2528 Male, age 74, both hemispheres 99.7
2246 Female, age 85, both hemispheres 96.7
2010 Male, age 76, both hemispheres 93.5
2531 Female, age 67, both hemispheres 85.9
1927 Female, age 91, both hemispheres 67.3
Entorhinal gyrus
nTPM: 97.8
2117 Female, age 91, right hemisphere 130.1
2764 Male, age 80, right hemisphere 102.1
2613 Female, age 94, left hemisphere 95.0
1938 Female, age 85, left hemisphere 88.6
1787 Male, age 76, left hemisphere 86.5
2686 Male, age 75, right hemisphere 84.5
Hippocampus, CA1
nTPM: 89.8
2527 Male, age 74, both hemispheres 109.6
2082 Female, age 91, right hemisphere 96.8
2749 Male, age 80, left hemisphere 95.2
1873 Female, age 85, both hemispheres 86.3
2045 Male, age 76, both hemispheres 61.3
Hippocampus, CA2
nTPM: 95.5
1963 Male, age 80, left hemisphere 125.2
1940 Female, age 85, left hemisphere 98.0
2249 Male, age 74, both hemispheres 97.4
2113 Female, age 91, right hemisphere 90.9
2437 Female, age 94, left hemisphere 90.7
1892 Male, age 76, both hemispheres 70.9
Hippocampus, CA3
nTPM: 85.5
1891 Female, age 85, both hemispheres 95.1
2137 Male, age 80, left hemisphere 94.7
2861 Female, age 67, both hemispheres 88.7
2620 Female, age 94, left hemisphere 79.1
1867 Male, age 76, both hemispheres 78.2
2436 Male, age 74, both hemispheres 76.9
Parahippocampal cortex
nTPM: 87.8
2692 Male, age 74, both hemispheres 123.2
2532 Female, age 72, left hemisphere 106.0
2245 Female, age 91, both hemispheres 94.8
1933 Female, age 85, both hemispheres 89.9
2018 Male, age 76, both hemispheres 88.2
1990 Female, age 91, right hemisphere 80.4
2622 Female, age 67, right hemisphere 77.5
1850 Male, age 80, both hemispheres 76.7
2250 Female, age 67, right hemisphere 74.8
2693 Female, age 94, both hemispheres 67.0
Perirhinal gyrus
nTPM: 75.4
2521 Female, age 94, right hemisphere 84.5
1794 Male, age 80, right hemisphere 83.5
1841 Female, age 85, right hemisphere 75.3
2848 Male, age 76, right hemisphere 68.0
1847 Female, age 91, left hemisphere 65.6
Subiculum
nTPM: 109.7
2042 Male, age 76, both hemispheres 151.0
2619 Male, age 74, both hemispheres 115.2
1901 Male, age 80, both hemispheres 111.6
1977 Female, age 85, both hemispheres 101.0
2438 Female, age 94, left hemisphere 91.4
2729 Female, age 91, right hemisphere 87.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.7
Samples: 197

Max nTPM: 142.8
Min nTPM: 22.5
Std nTPM: 20.4
Median nTPM: 60.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 142.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 135.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 133.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 116.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 114.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 111.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 109.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 107.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 106.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 105.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 103.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.3
FF:10153-102I9 76 years, female 156.5
FF:10169-103B7 60 years, female 86.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.3
Pig sample Sample description nTPM
Subiculum
nTPM: 37.6
Samples: 4

Max nTPM: 50.0
Min nTPM: 27.7
Sample A Female 50.0
Sample B Female 35.7
Sample C Male 37.0
Sample D Male 27.7
Dorsal hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 47.1
Min nTPM: 21.9
Sample A Female 47.1
Sample B Female 37.9
Sample C Male 42.3
Sample D Male 21.9
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 34.0
Min nTPM: 24.7
Sample A Female 32.7
Sample B Female 24.7
Sample C Male 34.0
Sample D Male 28.1
Ventral hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 52.6
Min nTPM: 30.8
Sample A Female 42.3
Sample B Female 30.8
Sample C Male 52.6
Sample D Male 39.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 35.6
Sample A Male 40.7
Sample B Male 35.6
Sample C Female 38.2
Sample D Female 43.4
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 41.4
Sample A Male 41.9
Sample B Male 44.0
Sample C Female 49.6
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
75826580 Antisense, RP_060601_01_B10, Mouse strain C57BL/6J (56 days, male) 2.3

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