HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:309.2 nTPM
HPA Brain:292.9 nTPM
GTEx:309.2 nTPM
FANTOM5:113.6 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:4.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021657
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 292.9
Sample id Sample description nTPM
Hippocampus
nTPM: 199.2
1911 Female, age 85, right hemisphere 300.6
2529 Female, age 94, left hemisphere 237.9
2621 Female, age 67, right hemisphere 183.6
1898 Male, age 80, left hemisphere 160.0
2148 Female, age 91, left hemisphere 157.5
1855 Male, age 76, left hemisphere 155.8
Dentate gyrus
nTPM: 213.3
2530 Female, age 94, left hemisphere 323.2
2010 Male, age 76, both hemispheres 239.3
2246 Female, age 85, both hemispheres 235.0
2528 Male, age 74, both hemispheres 215.1
2531 Female, age 67, both hemispheres 140.2
1927 Female, age 91, both hemispheres 126.9
Entorhinal gyrus
nTPM: 194.9
2764 Male, age 80, right hemisphere 322.5
2117 Female, age 91, right hemisphere 265.7
2686 Male, age 75, right hemisphere 179.6
2613 Female, age 94, left hemisphere 144.9
1938 Female, age 85, left hemisphere 137.5
1787 Male, age 76, left hemisphere 118.9
Hippocampus, CA1
nTPM: 164.0
1873 Female, age 85, both hemispheres 228.0
2082 Female, age 91, right hemisphere 225.1
2527 Male, age 74, both hemispheres 185.3
2749 Male, age 80, left hemisphere 122.6
2045 Male, age 76, both hemispheres 59.1
Hippocampus, CA2
nTPM: 206.9
1963 Male, age 80, left hemisphere 270.9
2249 Male, age 74, both hemispheres 237.6
2437 Female, age 94, left hemisphere 222.2
1940 Female, age 85, left hemisphere 214.6
2113 Female, age 91, right hemisphere 209.9
1892 Male, age 76, both hemispheres 86.0
Hippocampus, CA3
nTPM: 138.4
1891 Female, age 85, both hemispheres 356.9
1867 Male, age 76, both hemispheres 151.6
2436 Male, age 74, both hemispheres 116.0
2137 Male, age 80, left hemisphere 100.7
2620 Female, age 94, left hemisphere 60.6
2861 Female, age 67, both hemispheres 44.7
Parahippocampal cortex
nTPM: 159.4
2692 Male, age 74, both hemispheres 306.9
1990 Female, age 91, right hemisphere 210.0
2532 Female, age 72, left hemisphere 209.6
1850 Male, age 80, both hemispheres 199.5
2018 Male, age 76, both hemispheres 156.6
2245 Female, age 91, both hemispheres 131.3
1933 Female, age 85, both hemispheres 126.2
2693 Female, age 94, both hemispheres 122.2
2250 Female, age 67, right hemisphere 77.8
2622 Female, age 67, right hemisphere 53.8
Perirhinal gyrus
nTPM: 96.4
1794 Male, age 80, right hemisphere 124.4
2521 Female, age 94, right hemisphere 109.1
2848 Male, age 76, right hemisphere 96.3
1847 Female, age 91, left hemisphere 85.6
1841 Female, age 85, right hemisphere 66.5
Subiculum
nTPM: 292.9
2042 Male, age 76, both hemispheres 390.3
1901 Male, age 80, both hemispheres 366.5
2438 Female, age 94, left hemisphere 333.5
1977 Female, age 85, both hemispheres 233.0
2619 Male, age 74, both hemispheres 231.0
2729 Female, age 91, right hemisphere 203.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 309.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 309.2
Samples: 197

Max nTPM: 1696.1
Min nTPM: 11.7
Std nTPM: 241.3
Median nTPM: 249.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1696.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1434.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 1148.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1008.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 955.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 929.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 843.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 834.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 789.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 755.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 748.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.6
FF:10153-102I9 76 years, female 170.1
FF:10169-103B7 60 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Subiculum
nTPM: 3.2
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.4
Sample A Female 3.4
Sample B Female 3.8
Sample C Male 2.4
Sample D Male 3.2
Dorsal hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 2.5
Sample A Female 6.6
Sample B Female 4.7
Sample C Male 8.5
Sample D Male 2.5
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.3
Sample A Female 3.1
Sample B Female 3.4
Sample C Male 2.3
Sample D Male 3.1
Ventral hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 6.4
Min nTPM: 2.6
Sample A Female 4.5
Sample B Female 2.6
Sample C Male 4.5
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.0
Min nTPM: 3.3
Sample A Male 3.9
Sample B Male 4.0
Sample C Female 3.3
Sample D Female 3.9
Hippocampal formation
nTPM: 4.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 2.3
Sample A Male 4.5
Sample B Male 7.1
Sample C Female 2.3
Sample D Female 5.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69540733 Antisense, RP_050426_02_C12, Mouse strain C57BL/6J (56 days, male) 0.1

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