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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
387.6
nTPM
FANTOM5:
202.8
Scaled Tags Per Million
Pig:
9.8
nTPM
Allen mouse:
0.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
387.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 345.4
2090
Male, age 80, both hemispheres
476.2
2301
Female, age 85, both hemispheres
382.3
2188
Female, age 91, both hemispheres
346.1
1984
Male, age 76, both hemispheres
177.0
Dorsal cochlear nucleus nTPM: 322.5
2058
Male, age 76, both hemispheres
342.4
2187
Female, age 91, both hemispheres
330.9
2802
Male, age 74, right hemisphere
327.9
2370
Male, age 61, both hemispheres
309.7
2378
Male, age 80, both hemispheres
301.8
Dorsal tegmental nucleus nTPM: 338.3
2083
Male, age 80, both hemispheres
374.0
1936
Male, age 76, left hemisphere
370.4
2326
Male, age 74, both hemispheres
352.7
2358
Male, age 61, both hemispheres
255.9
Dorsolateral tegmental area nTPM: 333.8
2751
Female, age 85, both hemispheres
398.5
2337
Male, age 61, both hemispheres
385.2
2654
Male, age 80, both hemispheres
340.9
2360
Male, age 74, both hemispheres
276.3
2141
Male, age 76, both hemispheres
268.3
Kolliker-Fuse nucleus nTPM: 296.9
2793
Female, age 91, left hemisphere
428.4
2163
Male, age 80, both hemispheres
289.8
2315
Male, age 76, right hemisphere
172.5
Lateral lemniscal nuclei nTPM: 292.1
2320
Female, age 91, left hemisphere
371.6
2036
Male, age 80, both hemispheres
278.9
2746
Female, age 85, left hemisphere
274.4
2169
Male, age 76, both hemispheres
269.8
2453
Male, age 74, right hemisphere
265.9
Lateral parabrachial nucleus nTPM: 358.7
2792
Male, age 76, both hemispheres
423.3
2013
Male, age 80, both hemispheres
403.4
2790
Male, age 61, both hemispheres
391.2
2139
Female, age 85, right hemisphere
216.9
Lateral vestibular nucleus nTPM: 379.8
2184
Male, age 76, both hemispheres
423.9
2311
Male, age 80, both hemispheres
335.7
Locus coeruleus nTPM: 195.3
2720
Male, age 74, both hemispheres
293.6
2162
Male, age 80, both hemispheres
242.0
2317
Female, age 72, unknown
210.1
1980
Male, age 76, both hemispheres
166.5
2788
Male, age 74, unknown
163.4
2123
Female, age 91, both hemispheres
160.6
2014
Male, age 55, unknown
131.1
Medial parabrachial nucleus nTPM: 351.3
2786
Male, age 76, both hemispheres
420.1
2156
Male, age 61, both hemispheres
383.8
2170
Female, age 91, both hemispheres
354.7
2463
Female, age 85, right hemisphere
302.8
2854
Male, age 80, both hemispheres
295.1
Medial periolivary nuclei nTPM: 286.3
2458
Female, age 91, both hemispheres
428.5
2081
Male, age 80, both hemispheres
385.0
2791
Male, age 74, right hemisphere
262.4
2063
Male, age 76, both hemispheres
187.6
2171
Female, age 85, both hemispheres
168.0
Motor facial nucleus nTPM: 298.6
2697
Female, age 85, both hemispheres
411.0
2126
Male, age 61, both hemispheres
391.1
2795
Female, age 91, both hemispheres
279.4
2365
Male, age 74, right hemisphere
271.0
2327
Male, age 80, both hemispheres
266.9
2062
Male, age 76, both hemispheres
171.9
Motor trigeminal nucleus nTPM: 387.1
2321
Female, age 91, both hemispheres
460.4
2309
Male, age 76, both hemispheres
449.1
2560
Male, age 74, both hemispheres
367.2
2335
Male, age 61, both hemispheres
366.9
2079
Male, age 80, both hemispheres
292.1
Nuclei of the trapezoid body nTPM: 247.0
2166
Male, age 80, both hemispheres
385.3
2368
Female, age 91, both hemispheres
277.5
2159
Male, age 61, both hemispheres
258.0
1983
Male, age 76, both hemispheres
175.9
2735
Female, age 85, both hemispheres
138.5
Nucleus raphe magnus nTPM: 235.2
2459
Female, age 91, both hemispheres
349.8
2328
Male, age 80, both hemispheres
323.3
2051
Male, age 76, both hemispheres
251.6
2455
Male, age 74, both hemispheres
227.2
2160
Male, age 61, both hemispheres
138.9
2172
Female, age 85, both hemispheres
120.5
Paramedian reticular nucleus nTPM: 318.6
2052
Male, age 76, both hemispheres
377.8
2057
Male, age 80, both hemispheres
374.6
2313
Male, age 61, both hemispheres
263.3
2050
Female, age 85, both hemispheres
258.7
Pedunculopontine tegmental nucleus nTPM: 315.3
2338
Male, age 61, both hemispheres
337.2
2334
Male, age 80, both hemispheres
312.8
1921
Female, age 85, both hemispheres
295.9
Pontine nuclei nTPM: 327.0
2115
Male, age 80, left hemisphere
460.7
2319
Female, age 91, both hemispheres
429.7
1968
Male, age 76, left hemisphere
424.4
2454
Male, age 74, left hemisphere
364.1
2109
Female, age 72, unknown
294.1
1863
Male, age 55, unknown
253.3
2727
Male, age 61, right hemisphere
196.7
2787
Female, age 85, both hemispheres
192.9
Pontine raphe nucleus nTPM: 259.6
2853
Male, age 76, midline
319.7
2122
Female, age 85, midline
199.6
Posteroventral cochlear nucleus nTPM: 378.7
2135
Female, age 91, both hemispheres
434.5
2070
Male, age 76, both hemispheres
415.8
2341
Male, age 80, both hemispheres
403.1
2371
Male, age 61, both hemispheres
402.2
2752
Female, age 85, both hemispheres
237.7
Principal sensory trigeminal nucleus nTPM: 318.7
2367
Female, age 91, left hemisphere
408.1
2324
Male, age 76, both hemispheres
396.7
2008
Male, age 80, left hemisphere
261.0
2158
Male, age 61, both hemispheres
208.8
Reticular pontine nucleus, caudal nTPM: 355.0
2559
Male, age 74, both hemispheres
432.1
2457
Female, age 91, both hemispheres
401.3
2092
Male, age 76, both hemispheres
312.5
2332
Male, age 80, right hemisphere
274.3
Reticular pontine nucleus, oral nTPM: 387.6
2366
Female, age 91, both hemispheres
459.3
2167
Male, age 76, both hemispheres
438.9
1939
Male, age 80, both hemispheres
389.6
2361
Male, age 74, both hemispheres
325.8
2012
Female, age 85, both hemispheres
324.6
Reticulotegmental nucleus nTPM: 309.1
2452
Male, age 74, both hemispheres
391.3
2322
Female, age 91, both hemispheres
307.8
2333
Male, age 80, both hemispheres
280.1
2325
Male, age 76, both hemispheres
257.3
Spinal trigeminal nucleus, oral nTPM: 310.4
1978
Male, age 76, both hemispheres
360.4
2164
Male, age 80, both hemispheres
337.4
2737
Female, age 85, both hemispheres
233.5
Subcoeruleus area nTPM: 373.3
2369
Female, age 85, left hemisphere
480.1
2451
Male, age 74, both hemispheres
414.8
2089
Male, age 76, left hemisphere
395.8
2323
Female, age 91, left hemisphere
315.4
1958
Male, age 80, both hemispheres
260.4
Superior olive nTPM: 321.2
2329
Male, age 80, right hemisphere
375.4
2561
Female, age 91, both hemispheres
370.2
2020
Male, age 76, both hemispheres
326.0
1875
Female, age 85, both hemispheres
269.1
2364
Male, age 74, right hemisphere
265.1
Ventral periolivary nuclei nTPM: 267.0
2023
Male, age 76, both hemispheres
311.3
2794
Female, age 91, left hemisphere
300.0
2165
Male, age 80, both hemispheres
263.7
2130
Female, age 85, both hemispheres
193.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 339.1
2359
Male, age 61, both hemispheres
474.1
2456
Female, age 91, both hemispheres
455.2
2840
Female, age 85, both hemispheres
293.3
1959
Male, age 76, both hemispheres
289.8
2161
Male, age 80, both hemispheres
274.4
2449
Male, age 74, both hemispheres
247.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
9.8
Pig sample
Sample description
nTPM
Pons nTPM: 9.8
Samples: 4
Max nTPM: 12.6
Min nTPM: 6.8
Sample A
Female
6.8
Sample B
Female
11.9
Sample C
Male
8.0
Sample D
Male
12.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
