HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:173.7 nTPM
HPA Brain:572.8 nTPM
GTEx:173.7 nTPM
FANTOM5:514.0 Scaled Tags Per Million
Pig:238.4 nTPM
Mouse:79.2 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015247
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 572.8
Sample id Sample description nTPM
Hippocampus
nTPM: 511.4
2529 Female, age 94, left hemisphere 641.1
1911 Female, age 85, right hemisphere 570.6
2148 Female, age 91, left hemisphere 507.7
1898 Male, age 80, left hemisphere 505.6
1855 Male, age 76, left hemisphere 450.7
2621 Female, age 67, right hemisphere 392.7
Dentate gyrus
nTPM: 464.3
2528 Male, age 74, both hemispheres 687.7
2530 Female, age 94, left hemisphere 523.5
2010 Male, age 76, both hemispheres 483.3
2246 Female, age 85, both hemispheres 425.7
2531 Female, age 67, both hemispheres 346.6
1927 Female, age 91, both hemispheres 318.9
Entorhinal gyrus
nTPM: 474.7
2117 Female, age 91, right hemisphere 816.1
2764 Male, age 80, right hemisphere 542.9
1787 Male, age 76, left hemisphere 417.4
1938 Female, age 85, left hemisphere 397.7
2686 Male, age 75, right hemisphere 368.5
2613 Female, age 94, left hemisphere 306.0
Hippocampus, CA1
nTPM: 443.3
2527 Male, age 74, both hemispheres 590.2
1873 Female, age 85, both hemispheres 509.8
2082 Female, age 91, right hemisphere 481.6
2045 Male, age 76, both hemispheres 333.3
2749 Male, age 80, left hemisphere 301.4
Hippocampus, CA2
nTPM: 466.9
2249 Male, age 74, both hemispheres 613.2
1963 Male, age 80, left hemisphere 554.1
2113 Female, age 91, right hemisphere 546.9
2437 Female, age 94, left hemisphere 440.1
1940 Female, age 85, left hemisphere 391.5
1892 Male, age 76, both hemispheres 255.3
Hippocampus, CA3
nTPM: 402.7
1891 Female, age 85, both hemispheres 604.8
2620 Female, age 94, left hemisphere 443.3
2436 Male, age 74, both hemispheres 425.8
1867 Male, age 76, both hemispheres 349.4
2861 Female, age 67, both hemispheres 336.0
2137 Male, age 80, left hemisphere 256.7
Parahippocampal cortex
nTPM: 385.5
2692 Male, age 74, both hemispheres 511.3
1990 Female, age 91, right hemisphere 466.6
2018 Male, age 76, both hemispheres 452.7
2532 Female, age 72, left hemisphere 392.0
1933 Female, age 85, both hemispheres 391.9
2245 Female, age 91, both hemispheres 366.1
1850 Male, age 80, both hemispheres 348.1
2250 Female, age 67, right hemisphere 338.5
2622 Female, age 67, right hemisphere 297.6
2693 Female, age 94, both hemispheres 289.7
Perirhinal gyrus
nTPM: 297.8
1794 Male, age 80, right hemisphere 325.6
1847 Female, age 91, left hemisphere 307.9
2521 Female, age 94, right hemisphere 300.7
1841 Female, age 85, right hemisphere 281.4
2848 Male, age 76, right hemisphere 273.6
Subiculum
nTPM: 572.8
2042 Male, age 76, both hemispheres 672.1
2729 Female, age 91, right hemisphere 623.8
2619 Male, age 74, both hemispheres 607.5
1901 Male, age 80, both hemispheres 576.7
1977 Female, age 85, both hemispheres 537.8
2438 Female, age 94, left hemisphere 418.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 173.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 173.7
Samples: 197

Max nTPM: 498.3
Min nTPM: 41.0
Std nTPM: 81.2
Median nTPM: 156.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 498.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 413.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 403.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 372.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 355.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 346.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 343.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 342.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 342.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 340.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 337.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 514.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 514.0
FF:10153-102I9 76 years, female 715.4
FF:10169-103B7 60 years, female 312.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 238.4
Pig sample Sample description nTPM
Subiculum
nTPM: 172.4
Samples: 4

Max nTPM: 203.6
Min nTPM: 149.3
Sample A Female 203.6
Sample B Female 177.1
Sample C Male 149.3
Sample D Male 159.5
Dorsal hippocampus
nTPM: 238.4
Samples: 4

Max nTPM: 303.2
Min nTPM: 152.7
Sample A Female 303.2
Sample B Female 196.1
Sample C Male 301.4
Sample D Male 152.7
Entorhinal cortex
nTPM: 167.8
Samples: 4

Max nTPM: 200.0
Min nTPM: 149.4
Sample A Female 149.4
Sample B Female 200.0
Sample C Male 166.0
Sample D Male 155.6
Ventral hippocampus
nTPM: 201.4
Samples: 4

Max nTPM: 226.4
Min nTPM: 156.1
Sample A Female 196.6
Sample B Female 156.1
Sample C Male 226.4
Sample D Male 226.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.8
Samples: 4

Max nTPM: 75.6
Min nTPM: 55.5
Sample A Male 75.6
Sample B Male 61.5
Sample C Female 70.7
Sample D Female 55.5
Hippocampal formation
nTPM: 79.2
Samples: 4

Max nTPM: 86.6
Min nTPM: 75.5
Sample A Male 75.5
Sample B Male 76.1
Sample C Female 86.6
Sample D Female 78.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
71836881 Antisense, RP_051017_02_E11, Mouse strain C57BL/6J (56 days, male) 13.8
68633038 Antisense, RP_050125_02_C10, Mouse strain C57BL/6J (56 days, male) 11.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org