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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
665.6
nTPM
FANTOM5:
555.1
Scaled Tags Per Million
Pig:
331.0
nTPM
Allen mouse:
16.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
665.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 575.7
2090
Male, age 80, both hemispheres
674.6
2188
Female, age 91, both hemispheres
554.5
2301
Female, age 85, both hemispheres
549.1
1984
Male, age 76, both hemispheres
524.4
Dorsal cochlear nucleus nTPM: 603.9
2370
Male, age 61, both hemispheres
700.7
2378
Male, age 80, both hemispheres
619.1
2802
Male, age 74, right hemisphere
591.6
2058
Male, age 76, both hemispheres
583.7
2187
Female, age 91, both hemispheres
524.4
Dorsal tegmental nucleus nTPM: 536.5
2083
Male, age 80, both hemispheres
714.8
1936
Male, age 76, left hemisphere
531.2
2326
Male, age 74, both hemispheres
509.7
2358
Male, age 61, both hemispheres
390.1
Dorsolateral tegmental area nTPM: 532.3
2751
Female, age 85, both hemispheres
719.2
2654
Male, age 80, both hemispheres
647.4
2337
Male, age 61, both hemispheres
458.4
2360
Male, age 74, both hemispheres
419.5
2141
Male, age 76, both hemispheres
417.2
Kolliker-Fuse nucleus nTPM: 610.5
2315
Male, age 76, right hemisphere
743.5
2793
Female, age 91, left hemisphere
560.4
2163
Male, age 80, both hemispheres
527.5
Lateral lemniscal nuclei nTPM: 543.7
2036
Male, age 80, both hemispheres
588.9
2746
Female, age 85, left hemisphere
568.7
2169
Male, age 76, both hemispheres
550.3
2320
Female, age 91, left hemisphere
545.8
2453
Male, age 74, right hemisphere
464.8
Lateral parabrachial nucleus nTPM: 665.6
2792
Male, age 76, both hemispheres
789.1
2013
Male, age 80, both hemispheres
721.8
2139
Female, age 85, right hemisphere
617.7
2790
Male, age 61, both hemispheres
533.8
Lateral vestibular nucleus nTPM: 552.6
2311
Male, age 80, both hemispheres
555.5
2184
Male, age 76, both hemispheres
549.8
Locus coeruleus nTPM: 428.8
2317
Female, age 72, unknown
561.6
2014
Male, age 55, unknown
470.1
2162
Male, age 80, both hemispheres
467.5
2123
Female, age 91, both hemispheres
414.7
1980
Male, age 76, both hemispheres
393.4
2720
Male, age 74, both hemispheres
351.7
2788
Male, age 74, unknown
342.5
Medial parabrachial nucleus nTPM: 588.2
2463
Female, age 85, right hemisphere
780.0
2170
Female, age 91, both hemispheres
584.3
2156
Male, age 61, both hemispheres
557.4
2786
Male, age 76, both hemispheres
525.5
2854
Male, age 80, both hemispheres
493.9
Medial periolivary nuclei nTPM: 534.3
2081
Male, age 80, both hemispheres
616.9
2063
Male, age 76, both hemispheres
585.2
2791
Male, age 74, right hemisphere
570.5
2458
Female, age 91, both hemispheres
460.0
2171
Female, age 85, both hemispheres
438.8
Motor facial nucleus nTPM: 560.1
2126
Male, age 61, both hemispheres
719.3
2062
Male, age 76, both hemispheres
596.5
2795
Female, age 91, both hemispheres
573.4
2365
Male, age 74, right hemisphere
525.8
2327
Male, age 80, both hemispheres
473.2
2697
Female, age 85, both hemispheres
472.4
Motor trigeminal nucleus nTPM: 517.8
2309
Male, age 76, both hemispheres
542.1
2079
Male, age 80, both hemispheres
540.0
2560
Male, age 74, both hemispheres
519.6
2335
Male, age 61, both hemispheres
515.3
2321
Female, age 91, both hemispheres
472.0
Nuclei of the trapezoid body nTPM: 532.3
1983
Male, age 76, both hemispheres
594.7
2166
Male, age 80, both hemispheres
563.3
2368
Female, age 91, both hemispheres
540.9
2159
Male, age 61, both hemispheres
519.0
2735
Female, age 85, both hemispheres
443.6
Nucleus raphe magnus nTPM: 498.3
2328
Male, age 80, both hemispheres
591.8
2051
Male, age 76, both hemispheres
575.4
2459
Female, age 91, both hemispheres
554.5
2455
Male, age 74, both hemispheres
477.0
2160
Male, age 61, both hemispheres
413.5
2172
Female, age 85, both hemispheres
377.3
Paramedian reticular nucleus nTPM: 529.0
2057
Male, age 80, both hemispheres
655.5
2313
Male, age 61, both hemispheres
510.6
2050
Female, age 85, both hemispheres
507.5
2052
Male, age 76, both hemispheres
442.6
Pedunculopontine tegmental nucleus nTPM: 511.6
1921
Female, age 85, both hemispheres
572.8
2334
Male, age 80, both hemispheres
549.2
2338
Male, age 61, both hemispheres
412.7
Pontine nuclei nTPM: 575.9
1863
Male, age 55, unknown
671.0
1968
Male, age 76, left hemisphere
654.6
2454
Male, age 74, left hemisphere
593.0
2109
Female, age 72, unknown
580.8
2115
Male, age 80, left hemisphere
566.7
2787
Female, age 85, both hemispheres
549.1
2319
Female, age 91, both hemispheres
536.1
2727
Male, age 61, right hemisphere
456.3
Pontine raphe nucleus nTPM: 517.6
2853
Male, age 76, midline
523.1
2122
Female, age 85, midline
512.1
Posteroventral cochlear nucleus nTPM: 624.4
2371
Male, age 61, both hemispheres
741.0
2135
Female, age 91, both hemispheres
631.9
2070
Male, age 76, both hemispheres
628.1
2341
Male, age 80, both hemispheres
599.4
2752
Female, age 85, both hemispheres
521.6
Principal sensory trigeminal nucleus nTPM: 488.8
2324
Male, age 76, both hemispheres
525.7
2367
Female, age 91, left hemisphere
499.8
2008
Male, age 80, left hemisphere
489.1
2158
Male, age 61, both hemispheres
440.5
Reticular pontine nucleus, caudal nTPM: 567.2
2092
Male, age 76, both hemispheres
664.1
2457
Female, age 91, both hemispheres
545.2
2332
Male, age 80, right hemisphere
536.0
2559
Male, age 74, both hemispheres
523.3
Reticular pontine nucleus, oral nTPM: 586.1
1939
Male, age 80, both hemispheres
681.8
2012
Female, age 85, both hemispheres
600.0
2167
Male, age 76, both hemispheres
598.9
2366
Female, age 91, both hemispheres
552.3
2361
Male, age 74, both hemispheres
497.3
Reticulotegmental nucleus nTPM: 528.3
2333
Male, age 80, both hemispheres
637.5
2322
Female, age 91, both hemispheres
547.3
2452
Male, age 74, both hemispheres
490.2
2325
Male, age 76, both hemispheres
438.4
Spinal trigeminal nucleus, oral nTPM: 518.2
1978
Male, age 76, both hemispheres
558.8
2164
Male, age 80, both hemispheres
507.7
2737
Female, age 85, both hemispheres
488.1
Subcoeruleus area nTPM: 549.5
2369
Female, age 85, left hemisphere
806.0
2089
Male, age 76, left hemisphere
593.1
1958
Male, age 80, both hemispheres
494.6
2451
Male, age 74, both hemispheres
433.0
2323
Female, age 91, left hemisphere
420.8
Superior olive nTPM: 547.8
2020
Male, age 76, both hemispheres
674.3
2329
Male, age 80, right hemisphere
555.8
2364
Male, age 74, right hemisphere
547.1
1875
Female, age 85, both hemispheres
508.3
2561
Female, age 91, both hemispheres
453.6
Ventral periolivary nuclei nTPM: 490.2
2023
Male, age 76, both hemispheres
666.5
2165
Male, age 80, both hemispheres
527.8
2130
Female, age 85, both hemispheres
434.1
2794
Female, age 91, left hemisphere
332.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 546.5
2456
Female, age 91, both hemispheres
607.7
1959
Male, age 76, both hemispheres
575.4
2161
Male, age 80, both hemispheres
564.1
2359
Male, age 61, both hemispheres
557.1
2840
Female, age 85, both hemispheres
503.0
2449
Male, age 74, both hemispheres
471.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
331.0
Pig sample
Sample description
nTPM
Pons nTPM: 331.1
Samples: 4
Max nTPM: 443.7
Min nTPM: 262.3
Sample A
Female
317.2
Sample B
Female
262.3
Sample C
Male
301.0
Sample D
Male
443.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
