HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.1 nTPM
HPA Brain:40.6 nTPM
GTEx:23.1 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Pig:43.7 nTPM
Mouse:94.7 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010485
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
1898 Male, age 80, left hemisphere 42.2
2148 Female, age 91, left hemisphere 38.6
1855 Male, age 76, left hemisphere 38.1
2621 Female, age 67, right hemisphere 37.6
2529 Female, age 94, left hemisphere 36.2
1911 Female, age 85, right hemisphere 33.3
Dentate gyrus
nTPM: 37.4
2010 Male, age 76, both hemispheres 41.6
2530 Female, age 94, left hemisphere 41.4
1927 Female, age 91, both hemispheres 38.7
2528 Male, age 74, both hemispheres 38.5
2246 Female, age 85, both hemispheres 32.7
2531 Female, age 67, both hemispheres 31.2
Entorhinal gyrus
nTPM: 36.6
2117 Female, age 91, right hemisphere 39.6
1938 Female, age 85, left hemisphere 38.6
2764 Male, age 80, right hemisphere 38.5
1787 Male, age 76, left hemisphere 37.7
2613 Female, age 94, left hemisphere 33.5
2686 Male, age 75, right hemisphere 31.9
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 56.4
1873 Female, age 85, both hemispheres 40.6
2527 Male, age 74, both hemispheres 38.4
2045 Male, age 76, both hemispheres 34.1
2082 Female, age 91, right hemisphere 33.4
Hippocampus, CA2
nTPM: 38.4
1963 Male, age 80, left hemisphere 47.9
1892 Male, age 76, both hemispheres 40.6
2249 Male, age 74, both hemispheres 38.8
2437 Female, age 94, left hemisphere 35.8
2113 Female, age 91, right hemisphere 34.5
1940 Female, age 85, left hemisphere 33.1
Hippocampus, CA3
nTPM: 38.8
2137 Male, age 80, left hemisphere 49.1
1867 Male, age 76, both hemispheres 41.8
2436 Male, age 74, both hemispheres 37.3
2861 Female, age 67, both hemispheres 36.7
1891 Female, age 85, both hemispheres 35.1
2620 Female, age 94, left hemisphere 33.0
Parahippocampal cortex
nTPM: 33.7
1850 Male, age 80, both hemispheres 37.8
1990 Female, age 91, right hemisphere 36.4
2250 Female, age 67, right hemisphere 35.4
2692 Male, age 74, both hemispheres 34.3
1933 Female, age 85, both hemispheres 33.8
2018 Male, age 76, both hemispheres 33.3
2245 Female, age 91, both hemispheres 33.0
2622 Female, age 67, right hemisphere 32.3
2532 Female, age 72, left hemisphere 30.6
2693 Female, age 94, both hemispheres 30.2
Perirhinal gyrus
nTPM: 33.0
1847 Female, age 91, left hemisphere 37.2
1794 Male, age 80, right hemisphere 34.0
2521 Female, age 94, right hemisphere 32.0
1841 Female, age 85, right hemisphere 31.7
2848 Male, age 76, right hemisphere 30.1
Subiculum
nTPM: 35.6
1901 Male, age 80, both hemispheres 38.9
2729 Female, age 91, right hemisphere 36.9
2042 Male, age 76, both hemispheres 36.8
1977 Female, age 85, both hemispheres 36.2
2619 Male, age 74, both hemispheres 34.6
2438 Female, age 94, left hemisphere 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 37.9
Min nTPM: 16.9
Std nTPM: 3.3
Median nTPM: 22.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.9
FF:10153-102I9 76 years, female 58.5
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.7
Pig sample Sample description nTPM
Subiculum
nTPM: 39.7
Samples: 4

Max nTPM: 46.7
Min nTPM: 35.5
Sample A Female 46.7
Sample B Female 37.7
Sample C Male 35.5
Sample D Male 38.7
Dorsal hippocampus
nTPM: 43.2
Samples: 4

Max nTPM: 49.2
Min nTPM: 39.4
Sample A Female 49.2
Sample B Female 43.7
Sample C Male 40.4
Sample D Male 39.4
Entorhinal cortex
nTPM: 43.7
Samples: 4

Max nTPM: 47.8
Min nTPM: 39.1
Sample A Female 45.3
Sample B Female 47.8
Sample C Male 42.4
Sample D Male 39.1
Ventral hippocampus
nTPM: 37.7
Samples: 4

Max nTPM: 44.4
Min nTPM: 34.5
Sample A Female 37.1
Sample B Female 34.9
Sample C Male 34.5
Sample D Male 44.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.7
Samples: 4

Max nTPM: 92.1
Min nTPM: 83.3
Sample A Male 83.3
Sample B Male 92.1
Sample C Female 89.2
Sample D Female 90.2
Hippocampal formation
nTPM: 94.7
Samples: 4

Max nTPM: 99.1
Min nTPM: 87.4
Sample A Male 97.6
Sample B Male 94.8
Sample C Female 99.1
Sample D Female 87.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
79904741 Antisense, RP_080109_01_A02, Mouse strain C57BL/6J (56 days, male) 2.5
70919232 Antisense, RP_050712_04_H09, Mouse strain C57BL/6J (56 days, male) 0.7
70918904 Antisense, RP_050712_04_G04, Mouse strain C57BL/6J (56 days, male) 0.6

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