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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.2
nTPM
Monaco:
17.3
nTPM
Schmiedel:
13.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.2
HPA sample
nTPM
gdT-cell nTPM: 13.9
Samples: 6
Max nTPM: 16.5
Min nTPM: 9.4
P10809_1007
9.4
P10809_1022
15.0
P10809_1041
16.5
P10809_1060
11.2
P10809_1077
15.0
P10809_1098
16.2
MAIT T-cell nTPM: 14.6
Samples: 6
Max nTPM: 19.1
Min nTPM: 9.4
P10809_1006
9.8
P10809_1024
18.9
P10809_1043
19.1
P10809_1062
16.9
P10809_1083
13.2
P10809_1097
9.4
Memory CD4 T-cell nTPM: 14.3
Samples: 6
Max nTPM: 16.8
Min nTPM: 11.1
P10809_1014
11.1
P10809_1026
16.4
P10809_1045
16.8
P10809_1064
14.1
P10809_1086
13.9
P10809_1113
13.3
Memory CD8 T-cell nTPM: 14.3
Samples: 5
Max nTPM: 15.5
Min nTPM: 11.6
P10809_1012
15.3
P10809_1027
15.2
P10809_1046
11.6
P10809_1065
13.8
P10809_1111
15.5
Naive CD4 T-cell nTPM: 16.2
Samples: 6
Max nTPM: 24.7
Min nTPM: 10.5
P10809_1015
10.5
P10809_1030
18.4
P10809_1049
24.7
P10809_1068
13.8
P10809_1085
10.5
P10809_1112
19.5
Naive CD8 T-cell nTPM: 13.9
Samples: 6
Max nTPM: 16.8
Min nTPM: 10.8
P10809_1016
16.8
P10809_1031
12.0
P10809_1050
14.3
P10809_1069
10.8
P10809_1087
13.8
P10809_1110
15.9
T-reg nTPM: 20.2
Samples: 6
Max nTPM: 29.6
Min nTPM: 10.7
P10809_1018
18.6
P10809_1037
10.7
P10809_1056
21.4
P10809_1075
29.6
P10809_1094
22.7
P10809_1106
18.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 14.5
Min nTPM: 8.5
RHH5202_R3573
9.0
RHH5230_R3602
8.5
RHH5259_R3631
11.8
RHH5288_R3660
14.5
Effector memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 19.3
Min nTPM: 12.2
RHH5203_R3574
19.3
RHH5231_R3603
12.5
RHH5260_R3632
12.2
RHH5289_R3661
13.0
MAIT T-cell nTPM: 9.4
Samples: 4
Max nTPM: 13.0
Min nTPM: 6.7
RHH5233_R3605
13.0
RHH5205_R3576
6.7
RHH5262_R3634
8.4
RHH5297_R3663
9.3
Memory CD4 T-cell TFH nTPM: 17.4
Samples: 4
Max nTPM: 21.9
Min nTPM: 9.5
RHH5300_R3666
9.5
RHH5236_R3608
21.9
RHH5265_R3637
17.5
RHH5208_R3579
20.5
Memory CD4 T-cell Th1 nTPM: 15.1
Samples: 4
Max nTPM: 20.9
Min nTPM: 11.1
RHH5210_R3581
20.9
RHH5302_R3668
16.1
RHH5238_R3610
11.1
RHH5267_R3639
12.2
Memory CD4 T-cell Th1/Th17 nTPM: 10.1
Samples: 4
Max nTPM: 19.3
Min nTPM: 4.8
RHH5303_R3669
9.6
RHH5211_R3582
19.3
RHH5239_R3611
4.8
RHH5268_R3640
6.6
Memory CD4 T-cell Th17 nTPM: 12.3
Samples: 4
Max nTPM: 17.0
Min nTPM: 6.8
RHH5304_R3670
17.0
RHH5212_R3583
6.8
RHH5240_R3612
12.1
RHH5269_R3641
13.3
Memory CD4 T-cell Th2 nTPM: 16.7
Samples: 4
Max nTPM: 21.7
Min nTPM: 12.0
RHH5305_R3671
21.7
RHH5213_R3584
12.5
RHH5241_R3613
20.5
RHH5270_R3642
12.0
Naive CD4 T-cell nTPM: 14.8
Samples: 4
Max nTPM: 17.5
Min nTPM: 10.9
RHH5306_R3672
17.5
RHH5214_R3585
15.4
RHH5242_R3614
10.9
RHH5271_R3643
15.2
Naive CD8 T-cell nTPM: 13.2
Samples: 4
Max nTPM: 17.6
Min nTPM: 8.1
RHH5201_R3572
8.1
RHH5229_R3601
13.6
RHH5258_R3630
17.6
RHH5287_R3659
13.5
Non-Vd2 gdTCR nTPM: 9.3
Samples: 4
Max nTPM: 13.1
Min nTPM: 6.2
RHH5235_R3607
6.2
RHH5264_R3636
13.1
RHH5207_R3578
10.6
RHH5299_R3665
7.2
T-reg nTPM: 13.8
Samples: 4
Max nTPM: 16.4
Min nTPM: 11.3
RHH5301_R3667
16.4
RHH5237_R3609
15.7
RHH5266_R3638
11.7
RHH5209_R3580
11.3
Terminal effector memory CD4 T-cell nTPM: 8.9
Samples: 2
Max nTPM: 10.7
Min nTPM: 7.0
RHH5243_R3615
7.0
RHH5272_R3644
10.7
Terminal effector memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 12.6
Min nTPM: 8.4
RHH5232_R3604
10.8
RHH5204_R3575
10.1
RHH5261_R3633
8.4
RHH5296_R3662
12.6
Vd2 gdTCR nTPM: 8.1
Samples: 4
Max nTPM: 10.5
Min nTPM: 6.1
RHH5234_R3606
10.5
RHH5206_R3577
9.5
RHH5263_R3635
6.1
RHH5298_R3664
6.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
