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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
137.7
nTPM
Monaco:
179.0
nTPM
Schmiedel:
83.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.7
HPA sample
nTPM
gdT-cell nTPM: 41.7
Samples: 6
Max nTPM: 56.4
Min nTPM: 28.6
P10809_1007
28.6
P10809_1022
44.6
P10809_1041
36.9
P10809_1060
46.8
P10809_1077
56.4
P10809_1098
36.7
MAIT T-cell nTPM: 52.2
Samples: 6
Max nTPM: 58.7
Min nTPM: 48.7
P10809_1006
53.8
P10809_1024
51.6
P10809_1043
48.8
P10809_1062
58.7
P10809_1083
51.8
P10809_1097
48.7
Memory CD4 T-cell nTPM: 74.0
Samples: 6
Max nTPM: 86.0
Min nTPM: 60.3
P10809_1014
74.8
P10809_1026
82.7
P10809_1045
68.9
P10809_1064
60.3
P10809_1086
71.2
P10809_1113
86.0
Memory CD8 T-cell nTPM: 50.9
Samples: 5
Max nTPM: 57.3
Min nTPM: 42.9
P10809_1012
57.3
P10809_1027
51.1
P10809_1046
51.1
P10809_1065
52.1
P10809_1111
42.9
Naive CD4 T-cell nTPM: 56.2
Samples: 6
Max nTPM: 62.2
Min nTPM: 50.8
P10809_1015
50.8
P10809_1030
55.4
P10809_1049
51.1
P10809_1068
59.8
P10809_1085
62.2
P10809_1112
58.0
Naive CD8 T-cell nTPM: 38.9
Samples: 6
Max nTPM: 48.7
Min nTPM: 30.8
P10809_1016
30.8
P10809_1031
36.1
P10809_1050
39.0
P10809_1069
46.0
P10809_1087
48.7
P10809_1110
33.0
T-reg nTPM: 137.7
Samples: 6
Max nTPM: 171.3
Min nTPM: 117.9
P10809_1018
126.4
P10809_1037
117.9
P10809_1056
155.6
P10809_1075
135.4
P10809_1094
171.3
P10809_1106
119.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.5
Samples: 4
Max nTPM: 136.7
Min nTPM: 31.1
RHH5202_R3573
31.1
RHH5230_R3602
113.8
RHH5259_R3631
136.7
RHH5288_R3660
100.5
Effector memory CD8 T-cell nTPM: 124.7
Samples: 4
Max nTPM: 152.3
Min nTPM: 108.8
RHH5203_R3574
112.8
RHH5231_R3603
124.8
RHH5260_R3632
152.3
RHH5289_R3661
108.8
MAIT T-cell nTPM: 116.0
Samples: 4
Max nTPM: 124.2
Min nTPM: 100.2
RHH5233_R3605
100.2
RHH5205_R3576
124.2
RHH5262_R3634
121.2
RHH5297_R3663
118.2
Memory CD4 T-cell TFH nTPM: 131.2
Samples: 4
Max nTPM: 174.0
Min nTPM: 21.9
RHH5300_R3666
174.0
RHH5236_R3608
158.6
RHH5265_R3637
170.2
RHH5208_R3579
21.9
Memory CD4 T-cell Th1 nTPM: 130.7
Samples: 4
Max nTPM: 166.5
Min nTPM: 96.3
RHH5210_R3581
96.3
RHH5302_R3668
136.8
RHH5238_R3610
123.3
RHH5267_R3639
166.5
Memory CD4 T-cell Th1/Th17 nTPM: 140.2
Samples: 4
Max nTPM: 189.1
Min nTPM: 71.6
RHH5303_R3669
71.6
RHH5211_R3582
142.2
RHH5239_R3611
157.7
RHH5268_R3640
189.1
Memory CD4 T-cell Th17 nTPM: 158.2
Samples: 4
Max nTPM: 226.9
Min nTPM: 93.6
RHH5304_R3670
154.1
RHH5212_R3583
158.3
RHH5240_R3612
93.6
RHH5269_R3641
226.9
Memory CD4 T-cell Th2 nTPM: 145.1
Samples: 4
Max nTPM: 178.3
Min nTPM: 73.6
RHH5305_R3671
151.1
RHH5213_R3584
178.3
RHH5241_R3613
73.6
RHH5270_R3642
177.4
Naive CD4 T-cell nTPM: 127.0
Samples: 4
Max nTPM: 148.8
Min nTPM: 115.9
RHH5306_R3672
125.5
RHH5214_R3585
117.9
RHH5242_R3614
115.9
RHH5271_R3643
148.8
Naive CD8 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 93.7
Min nTPM: 12.8
RHH5201_R3572
12.8
RHH5229_R3601
82.0
RHH5258_R3630
93.7
RHH5287_R3659
91.0
Non-Vd2 gdTCR nTPM: 106.0
Samples: 4
Max nTPM: 133.8
Min nTPM: 67.7
RHH5235_R3607
122.4
RHH5264_R3636
67.7
RHH5207_R3578
99.9
RHH5299_R3665
133.8
T-reg nTPM: 179.0
Samples: 4
Max nTPM: 192.5
Min nTPM: 159.5
RHH5301_R3667
172.3
RHH5237_R3609
191.5
RHH5266_R3638
192.5
RHH5209_R3580
159.5
Terminal effector memory CD4 T-cell nTPM: 149.4
Samples: 2
Max nTPM: 160.4
Min nTPM: 138.4
RHH5243_R3615
160.4
RHH5272_R3644
138.4
Terminal effector memory CD8 T-cell nTPM: 125.5
Samples: 4
Max nTPM: 147.4
Min nTPM: 105.0
RHH5232_R3604
129.6
RHH5204_R3575
105.0
RHH5261_R3633
147.4
RHH5296_R3662
120.1
Vd2 gdTCR nTPM: 83.7
Samples: 4
Max nTPM: 103.6
Min nTPM: 66.4
RHH5234_R3606
72.3
RHH5206_R3577
92.4
RHH5263_R3635
103.6
RHH5298_R3664
66.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
