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RBFOX3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:47.4 nTPM
FANTOM5:94.7 Scaled Tags Per Million
Pig:70.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030790Antibody HPA075862
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.4
Samples: 246

Max nTPM: 115.5
Min nTPM: 4.0
Std nTPM: 25.1
Median nTPM: 46.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 115.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 112.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 108.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 99.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 97.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 95.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 95.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 95.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 93.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 90.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 89.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 89.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 84.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 84.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 83.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 83.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 80.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 80.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 80.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 79.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 78.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 78.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 78.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 77.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 76.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 74.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 74.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 74.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 73.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 73.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 73.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 73.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 73.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 71.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 71.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 70.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 70.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 69.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 67.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 67.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 67.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 67.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 66.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 66.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 66.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 64.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 64.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 64.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 63.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 63.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 62.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 61.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 61.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 61.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 60.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 59.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 58.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 57.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 57.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 57.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 57.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 56.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 55.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 54.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 54.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 53.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 52.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 51.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 51.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 50.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 49.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 49.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 48.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 47.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 46.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 46.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 45.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 44.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 44.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 43.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 43.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 43.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 42.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 42.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 41.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 41.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 40.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 39.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 38.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 37.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 37.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 37.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 36.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 35.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 35.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 35.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 35.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 34.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 34.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 34.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 33.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 32.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 32.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 30.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 29.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 28.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 28.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 26.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 25.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 25.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 25.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 24.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 23.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 23.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 22.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 22.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 21.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 20.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 19.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 19.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 19.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 19.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 17.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 17.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 17.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 17.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 17.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 16.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 15.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 15.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 15.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 15.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 15.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 14.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 13.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 13.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 12.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 12.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 12.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 10.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 7.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 6.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 5.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 5.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 94.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 94.7
FF:10164-103B2 76 years, female 94.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 70.7
Pig sample Sample description nTPM
Caudate
nTPM: 70.7
Samples: 4

Max nTPM: 93.9
Min nTPM: 54.4
Sample A Female 54.4
Sample B Female 67.7
Sample C Male 93.9
Sample D Male 66.7

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