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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
434.8
nTPM
Monaco:
152.6
nTPM
Schmiedel:
142.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
434.8
HPA sample
nTPM
gdT-cell nTPM: 222.0
Samples: 6
Max nTPM: 270.5
Min nTPM: 174.9
P10809_1007
174.9
P10809_1022
208.1
P10809_1041
270.5
P10809_1060
178.9
P10809_1077
247.2
P10809_1098
252.6
MAIT T-cell nTPM: 304.0
Samples: 6
Max nTPM: 408.6
Min nTPM: 180.2
P10809_1006
180.2
P10809_1024
303.3
P10809_1043
328.5
P10809_1062
329.8
P10809_1083
273.5
P10809_1097
408.6
Memory CD4 T-cell nTPM: 364.7
Samples: 6
Max nTPM: 393.9
Min nTPM: 315.2
P10809_1014
315.2
P10809_1026
393.9
P10809_1045
391.9
P10809_1064
383.7
P10809_1086
319.0
P10809_1113
384.2
Memory CD8 T-cell nTPM: 292.6
Samples: 5
Max nTPM: 344.0
Min nTPM: 204.6
P10809_1012
204.6
P10809_1027
273.8
P10809_1046
332.2
P10809_1065
344.0
P10809_1111
308.6
Naive CD4 T-cell nTPM: 434.8
Samples: 6
Max nTPM: 572.3
Min nTPM: 304.8
P10809_1015
325.5
P10809_1030
457.3
P10809_1049
572.3
P10809_1068
537.8
P10809_1085
304.8
P10809_1112
411.1
Naive CD8 T-cell nTPM: 345.9
Samples: 6
Max nTPM: 401.1
Min nTPM: 276.9
P10809_1016
401.1
P10809_1031
349.4
P10809_1050
344.8
P10809_1069
365.3
P10809_1087
276.9
P10809_1110
338.0
T-reg nTPM: 413.1
Samples: 6
Max nTPM: 477.2
Min nTPM: 302.7
P10809_1018
302.7
P10809_1037
436.0
P10809_1056
477.2
P10809_1075
455.7
P10809_1094
404.6
P10809_1106
402.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 153.7
Min nTPM: 86.3
RHH5202_R3573
102.4
RHH5230_R3602
86.3
RHH5259_R3631
94.7
RHH5288_R3660
153.7
Effector memory CD8 T-cell nTPM: 93.6
Samples: 4
Max nTPM: 108.7
Min nTPM: 60.8
RHH5203_R3574
96.2
RHH5231_R3603
108.6
RHH5260_R3632
60.8
RHH5289_R3661
108.7
MAIT T-cell nTPM: 121.7
Samples: 4
Max nTPM: 162.4
Min nTPM: 74.3
RHH5233_R3605
130.5
RHH5205_R3576
74.3
RHH5262_R3634
119.5
RHH5297_R3663
162.4
Memory CD4 T-cell TFH nTPM: 112.6
Samples: 4
Max nTPM: 139.0
Min nTPM: 88.1
RHH5300_R3666
103.0
RHH5236_R3608
120.2
RHH5265_R3637
88.1
RHH5208_R3579
139.0
Memory CD4 T-cell Th1 nTPM: 115.1
Samples: 4
Max nTPM: 152.6
Min nTPM: 86.4
RHH5210_R3581
124.5
RHH5302_R3668
152.6
RHH5238_R3610
86.4
RHH5267_R3639
96.7
Memory CD4 T-cell Th1/Th17 nTPM: 112.1
Samples: 4
Max nTPM: 176.8
Min nTPM: 70.7
RHH5303_R3669
176.8
RHH5211_R3582
118.8
RHH5239_R3611
70.7
RHH5268_R3640
82.1
Memory CD4 T-cell Th17 nTPM: 99.4
Samples: 4
Max nTPM: 126.5
Min nTPM: 73.7
RHH5304_R3670
114.3
RHH5212_R3583
126.5
RHH5240_R3612
83.0
RHH5269_R3641
73.7
Memory CD4 T-cell Th2 nTPM: 109.5
Samples: 4
Max nTPM: 140.3
Min nTPM: 80.5
RHH5305_R3671
140.3
RHH5213_R3584
97.0
RHH5241_R3613
120.2
RHH5270_R3642
80.5
Naive CD4 T-cell nTPM: 141.0
Samples: 4
Max nTPM: 185.2
Min nTPM: 106.8
RHH5306_R3672
185.2
RHH5214_R3585
155.3
RHH5242_R3614
106.8
RHH5271_R3643
116.8
Naive CD8 T-cell nTPM: 152.6
Samples: 4
Max nTPM: 194.1
Min nTPM: 132.2
RHH5201_R3572
194.1
RHH5229_R3601
132.2
RHH5258_R3630
147.0
RHH5287_R3659
137.1
Non-Vd2 gdTCR nTPM: 99.6
Samples: 4
Max nTPM: 139.4
Min nTPM: 64.7
RHH5235_R3607
64.7
RHH5264_R3636
139.4
RHH5207_R3578
79.2
RHH5299_R3665
115.0
T-reg nTPM: 111.6
Samples: 4
Max nTPM: 149.1
Min nTPM: 76.1
RHH5301_R3667
149.1
RHH5237_R3609
139.0
RHH5266_R3638
82.1
RHH5209_R3580
76.1
Terminal effector memory CD4 T-cell nTPM: 78.2
Samples: 2
Max nTPM: 104.5
Min nTPM: 51.8
RHH5243_R3615
51.8
RHH5272_R3644
104.5
Terminal effector memory CD8 T-cell nTPM: 87.1
Samples: 4
Max nTPM: 109.5
Min nTPM: 66.6
RHH5232_R3604
75.9
RHH5204_R3575
109.5
RHH5261_R3633
66.6
RHH5296_R3662
96.4
Vd2 gdTCR nTPM: 130.0
Samples: 4
Max nTPM: 146.7
Min nTPM: 113.9
RHH5234_R3606
113.9
RHH5206_R3577
144.0
RHH5263_R3635
115.4
RHH5298_R3664
146.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
