HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.9 nTPM
HPA Brain:45.1 nTPM
GTEx:46.9 nTPM
FANTOM5:44.2 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:39.3 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042720
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1898 Male, age 80, left hemisphere 49.8
1855 Male, age 76, left hemisphere 43.9
2148 Female, age 91, left hemisphere 42.9
2621 Female, age 67, right hemisphere 42.0
2529 Female, age 94, left hemisphere 38.3
1911 Female, age 85, right hemisphere 36.5
Dentate gyrus
nTPM: 43.0
2010 Male, age 76, both hemispheres 57.0
2531 Female, age 67, both hemispheres 45.5
2530 Female, age 94, left hemisphere 40.2
1927 Female, age 91, both hemispheres 39.6
2246 Female, age 85, both hemispheres 39.1
2528 Male, age 74, both hemispheres 36.6
Entorhinal gyrus
nTPM: 39.1
2764 Male, age 80, right hemisphere 43.6
2117 Female, age 91, right hemisphere 43.2
2686 Male, age 75, right hemisphere 41.1
2613 Female, age 94, left hemisphere 36.9
1938 Female, age 85, left hemisphere 36.2
1787 Male, age 76, left hemisphere 33.4
Hippocampus, CA1
nTPM: 45.1
2045 Male, age 76, both hemispheres 59.5
2749 Male, age 80, left hemisphere 42.3
2082 Female, age 91, right hemisphere 41.7
2527 Male, age 74, both hemispheres 41.3
1873 Female, age 85, both hemispheres 40.8
Hippocampus, CA2
nTPM: 39.9
1892 Male, age 76, both hemispheres 43.3
1963 Male, age 80, left hemisphere 43.0
2437 Female, age 94, left hemisphere 40.7
1940 Female, age 85, left hemisphere 39.4
2113 Female, age 91, right hemisphere 37.1
2249 Male, age 74, both hemispheres 35.7
Hippocampus, CA3
nTPM: 44.6
2861 Female, age 67, both hemispheres 48.3
1867 Male, age 76, both hemispheres 48.2
2620 Female, age 94, left hemisphere 45.1
1891 Female, age 85, both hemispheres 44.5
2436 Male, age 74, both hemispheres 41.2
2137 Male, age 80, left hemisphere 40.6
Parahippocampal cortex
nTPM: 40.1
2018 Male, age 76, both hemispheres 56.5
2693 Female, age 94, both hemispheres 41.7
1850 Male, age 80, both hemispheres 41.1
2692 Male, age 74, both hemispheres 39.4
2532 Female, age 72, left hemisphere 39.2
2245 Female, age 91, both hemispheres 38.0
1990 Female, age 91, right hemisphere 37.3
2622 Female, age 67, right hemisphere 37.1
1933 Female, age 85, both hemispheres 36.2
2250 Female, age 67, right hemisphere 34.6
Perirhinal gyrus
nTPM: 35.7
1794 Male, age 80, right hemisphere 39.7
1841 Female, age 85, right hemisphere 36.1
1847 Female, age 91, left hemisphere 36.1
2848 Male, age 76, right hemisphere 33.6
2521 Female, age 94, right hemisphere 33.2
Subiculum
nTPM: 43.7
2042 Male, age 76, both hemispheres 51.2
1901 Male, age 80, both hemispheres 46.9
2729 Female, age 91, right hemisphere 43.8
1977 Female, age 85, both hemispheres 42.8
2619 Male, age 74, both hemispheres 41.6
2438 Female, age 94, left hemisphere 36.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.9
Samples: 197

Max nTPM: 74.5
Min nTPM: 24.5
Std nTPM: 9.1
Median nTPM: 46.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 74.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 71.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 67.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 67.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 67.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 64.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 63.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 62.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 62.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.2
FF:10169-103B7 60 years, female 45.6
FF:10153-102I9 76 years, female 42.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.1
Sample A Female 13.3
Sample B Female 10.9
Sample C Male 10.1
Sample D Male 13.0
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 8.1
Sample A Female 14.2
Sample B Female 9.8
Sample C Male 13.7
Sample D Male 8.1
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.4
Sample A Female 10.6
Sample B Female 9.8
Sample C Male 11.2
Sample D Male 8.4
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.9
Min nTPM: 8.8
Sample A Female 11.3
Sample B Female 8.8
Sample C Male 14.9
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 39.1
Min nTPM: 28.9
Sample A Male 34.9
Sample B Male 32.3
Sample C Female 39.1
Sample D Female 28.9
Hippocampal formation
nTPM: 39.3
Samples: 4

Max nTPM: 39.9
Min nTPM: 38.5
Sample A Male 39.1
Sample B Male 38.5
Sample C Female 39.7
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68633152 Antisense, RP_050125_02_E03, Mouse strain C57BL/6J (56 days, male) 1.2

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