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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.5
nTPM
Monaco:
102.6
nTPM
Schmiedel:
21.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.5
HPA sample
nTPM
gdT-cell nTPM: 118.4
Samples: 6
Max nTPM: 154.0
Min nTPM: 91.1
P10809_1007
92.8
P10809_1022
141.1
P10809_1041
154.0
P10809_1060
91.1
P10809_1077
105.3
P10809_1098
126.0
MAIT T-cell nTPM: 117.1
Samples: 6
Max nTPM: 168.1
Min nTPM: 64.1
P10809_1006
64.1
P10809_1024
141.1
P10809_1043
168.1
P10809_1062
123.8
P10809_1083
83.0
P10809_1097
122.2
Memory CD4 T-cell nTPM: 117.1
Samples: 6
Max nTPM: 150.7
Min nTPM: 85.3
P10809_1014
85.3
P10809_1026
104.2
P10809_1045
150.7
P10809_1064
118.8
P10809_1086
109.9
P10809_1113
133.4
Memory CD8 T-cell nTPM: 119.5
Samples: 5
Max nTPM: 155.1
Min nTPM: 92.3
P10809_1012
92.3
P10809_1027
126.2
P10809_1046
155.1
P10809_1065
102.9
P10809_1111
120.8
Naive CD4 T-cell nTPM: 103.3
Samples: 6
Max nTPM: 128.9
Min nTPM: 66.3
P10809_1015
66.3
P10809_1030
98.6
P10809_1049
128.9
P10809_1068
113.8
P10809_1085
114.0
P10809_1112
98.0
Naive CD8 T-cell nTPM: 101.7
Samples: 6
Max nTPM: 113.3
Min nTPM: 81.1
P10809_1016
81.1
P10809_1031
113.3
P10809_1050
107.0
P10809_1069
111.1
P10809_1087
100.1
P10809_1110
97.6
T-reg nTPM: 143.5
Samples: 6
Max nTPM: 265.1
Min nTPM: 90.3
P10809_1018
90.3
P10809_1037
113.7
P10809_1056
265.1
P10809_1075
132.1
P10809_1094
119.0
P10809_1106
141.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.4
Samples: 4
Max nTPM: 86.0
Min nTPM: 44.4
RHH5202_R3573
79.1
RHH5230_R3602
56.1
RHH5259_R3631
44.4
RHH5288_R3660
86.0
Effector memory CD8 T-cell nTPM: 54.7
Samples: 4
Max nTPM: 68.5
Min nTPM: 35.9
RHH5203_R3574
68.5
RHH5231_R3603
61.2
RHH5260_R3632
35.9
RHH5289_R3661
53.3
MAIT T-cell nTPM: 68.2
Samples: 4
Max nTPM: 87.5
Min nTPM: 51.8
RHH5233_R3605
87.5
RHH5205_R3576
51.8
RHH5262_R3634
52.0
RHH5297_R3663
81.4
Memory CD4 T-cell TFH nTPM: 75.6
Samples: 4
Max nTPM: 125.3
Min nTPM: 46.7
RHH5300_R3666
63.4
RHH5236_R3608
125.3
RHH5265_R3637
46.7
RHH5208_R3579
67.0
Memory CD4 T-cell Th1 nTPM: 72.2
Samples: 4
Max nTPM: 118.9
Min nTPM: 51.3
RHH5210_R3581
64.7
RHH5302_R3668
118.9
RHH5238_R3610
54.0
RHH5267_R3639
51.3
Memory CD4 T-cell Th1/Th17 nTPM: 71.6
Samples: 4
Max nTPM: 110.1
Min nTPM: 34.7
RHH5303_R3669
110.1
RHH5211_R3582
82.6
RHH5239_R3611
34.7
RHH5268_R3640
59.0
Memory CD4 T-cell Th17 nTPM: 52.0
Samples: 4
Max nTPM: 56.3
Min nTPM: 45.4
RHH5304_R3670
56.3
RHH5212_R3583
55.3
RHH5240_R3612
45.4
RHH5269_R3641
50.8
Memory CD4 T-cell Th2 nTPM: 68.2
Samples: 4
Max nTPM: 109.4
Min nTPM: 42.4
RHH5305_R3671
69.4
RHH5213_R3584
51.6
RHH5241_R3613
109.4
RHH5270_R3642
42.4
Naive CD4 T-cell nTPM: 64.3
Samples: 4
Max nTPM: 87.2
Min nTPM: 47.6
RHH5306_R3672
71.1
RHH5214_R3585
87.2
RHH5242_R3614
51.1
RHH5271_R3643
47.6
Naive CD8 T-cell nTPM: 48.3
Samples: 4
Max nTPM: 62.9
Min nTPM: 34.2
RHH5201_R3572
59.9
RHH5229_R3601
36.1
RHH5258_R3630
62.9
RHH5287_R3659
34.2
Non-Vd2 gdTCR nTPM: 76.0
Samples: 4
Max nTPM: 114.9
Min nTPM: 37.7
RHH5235_R3607
37.7
RHH5264_R3636
81.4
RHH5207_R3578
69.9
RHH5299_R3665
114.9
T-reg nTPM: 66.9
Samples: 4
Max nTPM: 97.8
Min nTPM: 48.7
RHH5301_R3667
97.8
RHH5237_R3609
72.0
RHH5266_R3638
49.1
RHH5209_R3580
48.7
Terminal effector memory CD4 T-cell nTPM: 71.8
Samples: 2
Max nTPM: 85.5
Min nTPM: 58.1
RHH5243_R3615
58.1
RHH5272_R3644
85.5
Terminal effector memory CD8 T-cell nTPM: 98.3
Samples: 4
Max nTPM: 170.8
Min nTPM: 64.3
RHH5232_R3604
72.5
RHH5204_R3575
170.8
RHH5261_R3633
64.3
RHH5296_R3662
85.4
Vd2 gdTCR nTPM: 102.6
Samples: 4
Max nTPM: 142.5
Min nTPM: 53.9
RHH5234_R3606
78.4
RHH5206_R3577
142.5
RHH5263_R3635
53.9
RHH5298_R3664
135.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
