HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:83.8 nTPM
HPA Brain:26.2 nTPM
GTEx:83.8 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Mouse:30.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047089Antibody HPA053624Antibody CAB004685
Glial cells LowNot detectedLow
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
2621 Female, age 67, right hemisphere 29.9
1898 Male, age 80, left hemisphere 27.6
2529 Female, age 94, left hemisphere 27.6
1911 Female, age 85, right hemisphere 26.7
1855 Male, age 76, left hemisphere 21.7
2148 Female, age 91, left hemisphere 17.3
Dentate gyrus
nTPM: 23.4
2530 Female, age 94, left hemisphere 42.7
2010 Male, age 76, both hemispheres 32.0
2531 Female, age 67, both hemispheres 20.7
2246 Female, age 85, both hemispheres 20.1
1927 Female, age 91, both hemispheres 16.8
2528 Male, age 74, both hemispheres 8.1
Entorhinal gyrus
nTPM: 19.4
2686 Male, age 75, right hemisphere 25.9
2117 Female, age 91, right hemisphere 21.6
1787 Male, age 76, left hemisphere 20.3
1938 Female, age 85, left hemisphere 18.1
2764 Male, age 80, right hemisphere 15.9
2613 Female, age 94, left hemisphere 14.4
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 47.6
2527 Male, age 74, both hemispheres 20.1
2045 Male, age 76, both hemispheres 16.5
1873 Female, age 85, both hemispheres 16.2
2082 Female, age 91, right hemisphere 12.4
Hippocampus, CA2
nTPM: 21.2
2437 Female, age 94, left hemisphere 25.9
1940 Female, age 85, left hemisphere 25.8
1892 Male, age 76, both hemispheres 21.7
1963 Male, age 80, left hemisphere 21.2
2249 Male, age 74, both hemispheres 16.6
2113 Female, age 91, right hemisphere 16.4
Hippocampus, CA3
nTPM: 26.2
2137 Male, age 80, left hemisphere 49.4
1867 Male, age 76, both hemispheres 34.9
2861 Female, age 67, both hemispheres 26.2
1891 Female, age 85, both hemispheres 18.2
2620 Female, age 94, left hemisphere 14.5
2436 Male, age 74, both hemispheres 13.6
Parahippocampal cortex
nTPM: 21.2
2018 Male, age 76, both hemispheres 35.0
2245 Female, age 91, both hemispheres 34.7
2532 Female, age 72, left hemisphere 22.6
1850 Male, age 80, both hemispheres 19.9
1990 Female, age 91, right hemisphere 19.2
2250 Female, age 67, right hemisphere 18.8
1933 Female, age 85, both hemispheres 17.0
2692 Male, age 74, both hemispheres 15.8
2622 Female, age 67, right hemisphere 15.6
2693 Female, age 94, both hemispheres 12.9
Perirhinal gyrus
nTPM: 17.5
1841 Female, age 85, right hemisphere 22.8
1794 Male, age 80, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.1
1847 Female, age 91, left hemisphere 16.4
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 25.3
2042 Male, age 76, both hemispheres 40.3
1901 Male, age 80, both hemispheres 36.1
2438 Female, age 94, left hemisphere 28.6
1977 Female, age 85, both hemispheres 20.6
2619 Male, age 74, both hemispheres 16.1
2729 Female, age 91, right hemisphere 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.8
Samples: 197

Max nTPM: 234.8
Min nTPM: 41.6
Std nTPM: 28.1
Median nTPM: 76.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 234.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 220.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 171.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 153.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 152.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 148.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 148.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 140.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 136.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 135.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 133.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 53.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 27.8
Sample A Male 32.0
Sample B Male 28.6
Sample C Female 31.7
Sample D Female 27.8
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 29.6
Min nTPM: 27.8
Sample A Male 29.6
Sample B Male 27.8
Sample C Female 28.6
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69817037 Antisense, RP_050510_02_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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