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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
150.7
nTPM
Monaco:
236.4
nTPM
Schmiedel:
118.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.7
HPA sample
nTPM
gdT-cell nTPM: 96.0
Samples: 6
Max nTPM: 130.9
Min nTPM: 67.7
P10809_1007
70.5
P10809_1022
130.9
P10809_1041
123.7
P10809_1060
67.7
P10809_1077
100.4
P10809_1098
82.9
MAIT T-cell nTPM: 71.3
Samples: 6
Max nTPM: 86.7
Min nTPM: 49.2
P10809_1006
49.2
P10809_1024
83.6
P10809_1043
79.0
P10809_1062
61.5
P10809_1083
67.5
P10809_1097
86.7
Memory CD4 T-cell nTPM: 69.0
Samples: 6
Max nTPM: 85.3
Min nTPM: 42.9
P10809_1014
42.9
P10809_1026
60.8
P10809_1045
66.7
P10809_1064
79.8
P10809_1086
85.3
P10809_1113
78.4
Memory CD8 T-cell nTPM: 83.9
Samples: 5
Max nTPM: 100.5
Min nTPM: 62.6
P10809_1012
62.6
P10809_1027
82.4
P10809_1046
100.5
P10809_1065
89.4
P10809_1111
84.4
Naive CD4 T-cell nTPM: 18.6
Samples: 6
Max nTPM: 35.1
Min nTPM: 10.6
P10809_1015
10.6
P10809_1030
13.7
P10809_1049
14.9
P10809_1068
15.4
P10809_1085
35.1
P10809_1112
21.9
Naive CD8 T-cell nTPM: 47.4
Samples: 6
Max nTPM: 77.5
Min nTPM: 16.6
P10809_1016
16.6
P10809_1031
35.0
P10809_1050
54.4
P10809_1069
69.2
P10809_1087
77.5
P10809_1110
31.7
T-reg nTPM: 150.8
Samples: 6
Max nTPM: 179.0
Min nTPM: 128.1
P10809_1018
128.1
P10809_1037
146.4
P10809_1056
156.6
P10809_1075
161.9
P10809_1094
132.5
P10809_1106
179.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 91.8
Samples: 4
Max nTPM: 108.0
Min nTPM: 73.6
RHH5202_R3573
78.0
RHH5230_R3602
73.6
RHH5259_R3631
108.0
RHH5288_R3660
107.4
Effector memory CD8 T-cell nTPM: 236.4
Samples: 4
Max nTPM: 305.6
Min nTPM: 171.6
RHH5203_R3574
265.4
RHH5231_R3603
171.6
RHH5260_R3632
202.9
RHH5289_R3661
305.6
MAIT T-cell nTPM: 131.6
Samples: 4
Max nTPM: 182.6
Min nTPM: 78.3
RHH5233_R3605
78.3
RHH5205_R3576
182.6
RHH5262_R3634
166.6
RHH5297_R3663
99.0
Memory CD4 T-cell TFH nTPM: 78.0
Samples: 4
Max nTPM: 94.1
Min nTPM: 63.8
RHH5300_R3666
63.8
RHH5236_R3608
76.6
RHH5265_R3637
77.3
RHH5208_R3579
94.1
Memory CD4 T-cell Th1 nTPM: 109.5
Samples: 4
Max nTPM: 148.8
Min nTPM: 58.6
RHH5210_R3581
58.6
RHH5302_R3668
112.5
RHH5238_R3610
117.9
RHH5267_R3639
148.8
Memory CD4 T-cell Th1/Th17 nTPM: 122.5
Samples: 4
Max nTPM: 128.1
Min nTPM: 115.8
RHH5303_R3669
128.1
RHH5211_R3582
124.8
RHH5239_R3611
121.2
RHH5268_R3640
115.8
Memory CD4 T-cell Th17 nTPM: 126.9
Samples: 4
Max nTPM: 136.1
Min nTPM: 112.3
RHH5304_R3670
112.3
RHH5212_R3583
136.1
RHH5240_R3612
124.9
RHH5269_R3641
134.1
Memory CD4 T-cell Th2 nTPM: 101.0
Samples: 4
Max nTPM: 138.7
Min nTPM: 43.9
RHH5305_R3671
98.2
RHH5213_R3584
123.1
RHH5241_R3613
43.9
RHH5270_R3642
138.7
Naive CD4 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 27.1
Min nTPM: 18.9
RHH5306_R3672
23.3
RHH5214_R3585
27.1
RHH5242_R3614
18.9
RHH5271_R3643
25.6
Naive CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 28.8
Min nTPM: 11.6
RHH5201_R3572
11.6
RHH5229_R3601
18.0
RHH5258_R3630
27.5
RHH5287_R3659
28.8
Non-Vd2 gdTCR nTPM: 168.2
Samples: 4
Max nTPM: 226.6
Min nTPM: 112.3
RHH5235_R3607
112.3
RHH5264_R3636
140.3
RHH5207_R3578
226.6
RHH5299_R3665
193.4
T-reg nTPM: 124.2
Samples: 4
Max nTPM: 153.0
Min nTPM: 92.4
RHH5301_R3667
113.1
RHH5237_R3609
153.0
RHH5266_R3638
138.1
RHH5209_R3580
92.4
Terminal effector memory CD4 T-cell nTPM: 146.0
Samples: 2
Max nTPM: 196.7
Min nTPM: 95.3
RHH5243_R3615
196.7
RHH5272_R3644
95.3
Terminal effector memory CD8 T-cell nTPM: 178.7
Samples: 4
Max nTPM: 225.5
Min nTPM: 138.6
RHH5232_R3604
140.4
RHH5204_R3575
138.6
RHH5261_R3633
225.5
RHH5296_R3662
210.4
Vd2 gdTCR nTPM: 129.1
Samples: 4
Max nTPM: 208.4
Min nTPM: 85.2
RHH5234_R3606
105.1
RHH5206_R3577
208.4
RHH5263_R3635
117.8
RHH5298_R3664
85.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
