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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
340.9
nTPM
Monaco:
141.1
nTPM
Schmiedel:
161.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
340.9
HPA sample
nTPM
gdT-cell nTPM: 220.8
Samples: 6
Max nTPM: 309.5
Min nTPM: 167.8
P10809_1007
167.8
P10809_1022
241.0
P10809_1041
309.5
P10809_1060
204.3
P10809_1077
174.0
P10809_1098
228.3
MAIT T-cell nTPM: 258.0
Samples: 6
Max nTPM: 332.9
Min nTPM: 165.7
P10809_1006
165.7
P10809_1024
265.8
P10809_1043
332.9
P10809_1062
240.0
P10809_1083
227.0
P10809_1097
316.6
Memory CD4 T-cell nTPM: 321.8
Samples: 6
Max nTPM: 390.9
Min nTPM: 249.2
P10809_1014
266.6
P10809_1026
390.6
P10809_1045
390.9
P10809_1064
275.3
P10809_1086
249.2
P10809_1113
357.9
Memory CD8 T-cell nTPM: 231.3
Samples: 5
Max nTPM: 280.1
Min nTPM: 186.5
P10809_1012
194.9
P10809_1027
231.5
P10809_1046
280.1
P10809_1065
186.5
P10809_1111
263.4
Naive CD4 T-cell nTPM: 340.9
Samples: 6
Max nTPM: 438.9
Min nTPM: 250.5
P10809_1015
250.5
P10809_1030
438.4
P10809_1049
438.9
P10809_1068
293.0
P10809_1085
260.8
P10809_1112
363.9
Naive CD8 T-cell nTPM: 246.4
Samples: 6
Max nTPM: 294.6
Min nTPM: 162.8
P10809_1016
254.9
P10809_1031
294.6
P10809_1050
265.8
P10809_1069
227.0
P10809_1087
162.8
P10809_1110
273.0
T-reg nTPM: 311.2
Samples: 6
Max nTPM: 464.3
Min nTPM: 211.7
P10809_1018
211.7
P10809_1037
288.6
P10809_1056
464.3
P10809_1075
285.4
P10809_1094
316.3
P10809_1106
300.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.4
Samples: 4
Max nTPM: 128.7
Min nTPM: 82.3
RHH5202_R3573
86.1
RHH5230_R3602
82.3
RHH5259_R3631
116.3
RHH5288_R3660
128.7
Effector memory CD8 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 75.1
Min nTPM: 45.4
RHH5203_R3574
45.4
RHH5231_R3603
75.1
RHH5260_R3632
58.0
RHH5289_R3661
47.2
MAIT T-cell nTPM: 88.4
Samples: 4
Max nTPM: 140.4
Min nTPM: 61.6
RHH5233_R3605
70.3
RHH5205_R3576
61.6
RHH5262_R3634
81.2
RHH5297_R3663
140.4
Memory CD4 T-cell TFH nTPM: 135.6
Samples: 4
Max nTPM: 195.2
Min nTPM: 96.7
RHH5300_R3666
122.6
RHH5236_R3608
195.2
RHH5265_R3637
96.7
RHH5208_R3579
127.7
Memory CD4 T-cell Th1 nTPM: 141.2
Samples: 4
Max nTPM: 219.6
Min nTPM: 101.2
RHH5210_R3581
101.2
RHH5302_R3668
219.6
RHH5238_R3610
134.7
RHH5267_R3639
109.1
Memory CD4 T-cell Th1/Th17 nTPM: 116.0
Samples: 4
Max nTPM: 147.3
Min nTPM: 73.5
RHH5303_R3669
147.3
RHH5211_R3582
134.4
RHH5239_R3611
73.5
RHH5268_R3640
108.8
Memory CD4 T-cell Th17 nTPM: 101.0
Samples: 4
Max nTPM: 141.4
Min nTPM: 75.4
RHH5304_R3670
97.4
RHH5212_R3583
141.4
RHH5240_R3612
89.7
RHH5269_R3641
75.4
Memory CD4 T-cell Th2 nTPM: 118.3
Samples: 4
Max nTPM: 155.0
Min nTPM: 96.8
RHH5305_R3671
105.2
RHH5213_R3584
116.0
RHH5241_R3613
155.0
RHH5270_R3642
96.8
Naive CD4 T-cell nTPM: 120.5
Samples: 4
Max nTPM: 194.7
Min nTPM: 76.3
RHH5306_R3672
113.9
RHH5214_R3585
194.7
RHH5242_R3614
97.1
RHH5271_R3643
76.3
Naive CD8 T-cell nTPM: 92.5
Samples: 4
Max nTPM: 109.8
Min nTPM: 65.9
RHH5201_R3572
90.0
RHH5229_R3601
65.9
RHH5258_R3630
109.8
RHH5287_R3659
104.2
Non-Vd2 gdTCR nTPM: 84.1
Samples: 4
Max nTPM: 126.2
Min nTPM: 60.7
RHH5235_R3607
62.4
RHH5264_R3636
87.2
RHH5207_R3578
60.7
RHH5299_R3665
126.2
T-reg nTPM: 126.1
Samples: 4
Max nTPM: 166.5
Min nTPM: 87.7
RHH5301_R3667
166.5
RHH5237_R3609
122.8
RHH5266_R3638
87.7
RHH5209_R3580
127.5
Terminal effector memory CD4 T-cell nTPM: 71.4
Samples: 2
Max nTPM: 87.7
Min nTPM: 55.0
RHH5243_R3615
55.0
RHH5272_R3644
87.7
Terminal effector memory CD8 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 181.2
Min nTPM: 57.7
RHH5232_R3604
57.7
RHH5204_R3575
181.2
RHH5261_R3633
58.4
RHH5296_R3662
82.8
Vd2 gdTCR nTPM: 112.7
Samples: 4
Max nTPM: 164.6
Min nTPM: 63.0
RHH5234_R3606
63.0
RHH5206_R3577
145.8
RHH5263_R3635
77.3
RHH5298_R3664
164.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
