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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
8538.9
nTPM
Monaco:
2195.9
nTPM
Schmiedel:
719.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
8538.9
HPA sample
nTPM
gdT-cell nTPM: 3790.2
Samples: 6
Max nTPM: 4867.0
Min nTPM: 2719.5
P10809_1007
3866.5
P10809_1022
4329.9
P10809_1041
4867.0
P10809_1060
2719.5
P10809_1077
2839.0
P10809_1098
4119.1
MAIT T-cell nTPM: 7023.8
Samples: 6
Max nTPM: 8683.3
Min nTPM: 5227.6
P10809_1006
6395.8
P10809_1024
7533.1
P10809_1043
7567.6
P10809_1062
6735.5
P10809_1083
5227.6
P10809_1097
8683.3
Memory CD4 T-cell nTPM: 6836.1
Samples: 6
Max nTPM: 9155.5
Min nTPM: 4250.4
P10809_1014
7041.7
P10809_1026
9155.5
P10809_1045
7704.6
P10809_1064
5068.0
P10809_1086
4250.4
P10809_1113
7796.3
Memory CD8 T-cell nTPM: 5176.0
Samples: 5
Max nTPM: 6168.8
Min nTPM: 3741.1
P10809_1012
5729.6
P10809_1027
4831.8
P10809_1046
6168.8
P10809_1065
3741.1
P10809_1111
5408.9
Naive CD4 T-cell nTPM: 8538.9
Samples: 6
Max nTPM: 10595.6
Min nTPM: 6682.4
P10809_1015
8058.5
P10809_1030
9256.6
P10809_1049
10595.6
P10809_1068
8130.1
P10809_1085
6682.4
P10809_1112
8510.1
Naive CD8 T-cell nTPM: 6745.5
Samples: 6
Max nTPM: 9443.6
Min nTPM: 2885.6
P10809_1016
9443.6
P10809_1031
7656.6
P10809_1050
6539.9
P10809_1069
5840.6
P10809_1087
2885.6
P10809_1110
8106.8
T-reg nTPM: 5294.8
Samples: 6
Max nTPM: 6219.4
Min nTPM: 4570.5
P10809_1018
4570.5
P10809_1037
4759.0
P10809_1056
6219.4
P10809_1075
4871.6
P10809_1094
5864.4
P10809_1106
5483.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2195.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1443.4
Samples: 4
Max nTPM: 1740.2
Min nTPM: 1014.2
RHH5202_R3573
1014.2
RHH5230_R3602
1590.9
RHH5259_R3631
1428.4
RHH5288_R3660
1740.2
Effector memory CD8 T-cell nTPM: 573.3
Samples: 4
Max nTPM: 785.9
Min nTPM: 361.5
RHH5203_R3574
539.9
RHH5231_R3603
605.9
RHH5260_R3632
785.9
RHH5289_R3661
361.5
MAIT T-cell nTPM: 1369.7
Samples: 4
Max nTPM: 2047.1
Min nTPM: 1059.8
RHH5233_R3605
1059.8
RHH5205_R3576
1078.6
RHH5262_R3634
1293.2
RHH5297_R3663
2047.1
Memory CD4 T-cell TFH nTPM: 1694.4
Samples: 4
Max nTPM: 2465.8
Min nTPM: 1273.5
RHH5300_R3666
1686.1
RHH5236_R3608
2465.8
RHH5265_R3637
1273.5
RHH5208_R3579
1352.3
Memory CD4 T-cell Th1 nTPM: 1842.2
Samples: 4
Max nTPM: 2749.7
Min nTPM: 1133.2
RHH5210_R3581
1133.2
RHH5302_R3668
2749.7
RHH5238_R3610
2077.7
RHH5267_R3639
1408.2
Memory CD4 T-cell Th1/Th17 nTPM: 1638.5
Samples: 4
Max nTPM: 2143.1
Min nTPM: 1307.5
RHH5303_R3669
2143.1
RHH5211_R3582
1438.1
RHH5239_R3611
1307.5
RHH5268_R3640
1665.4
Memory CD4 T-cell Th17 nTPM: 1400.7
Samples: 4
Max nTPM: 1789.4
Min nTPM: 1036.5
RHH5304_R3670
1789.4
RHH5212_R3583
1497.4
RHH5240_R3612
1279.4
RHH5269_R3641
1036.5
Memory CD4 T-cell Th2 nTPM: 1586.5
Samples: 4
Max nTPM: 2028.3
Min nTPM: 1199.7
RHH5305_R3671
2028.3
RHH5213_R3584
1289.2
RHH5241_R3613
1828.8
RHH5270_R3642
1199.7
Naive CD4 T-cell nTPM: 2195.9
Samples: 4
Max nTPM: 2860.5
Min nTPM: 1585.6
RHH5306_R3672
2732.2
RHH5214_R3585
2860.5
RHH5242_R3614
1605.4
RHH5271_R3643
1585.6
Naive CD8 T-cell nTPM: 1772.9
Samples: 4
Max nTPM: 2051.6
Min nTPM: 1306.8
RHH5201_R3572
1306.8
RHH5229_R3601
1693.0
RHH5258_R3630
2040.3
RHH5287_R3659
2051.6
Non-Vd2 gdTCR nTPM: 770.3
Samples: 4
Max nTPM: 1123.0
Min nTPM: 484.3
RHH5235_R3607
716.5
RHH5264_R3636
757.5
RHH5207_R3578
484.3
RHH5299_R3665
1123.0
T-reg nTPM: 1686.6
Samples: 4
Max nTPM: 2285.6
Min nTPM: 1284.3
RHH5301_R3667
2285.6
RHH5237_R3609
1543.6
RHH5266_R3638
1284.3
RHH5209_R3580
1633.0
Terminal effector memory CD4 T-cell nTPM: 766.2
Samples: 2
Max nTPM: 905.2
Min nTPM: 627.2
RHH5243_R3615
627.2
RHH5272_R3644
905.2
Terminal effector memory CD8 T-cell nTPM: 982.4
Samples: 4
Max nTPM: 1552.1
Min nTPM: 633.8
RHH5232_R3604
633.8
RHH5204_R3575
1552.1
RHH5261_R3633
824.1
RHH5296_R3662
919.5
Vd2 gdTCR nTPM: 1592.3
Samples: 4
Max nTPM: 2316.5
Min nTPM: 1123.7
RHH5234_R3606
1134.4
RHH5206_R3577
1794.6
RHH5263_R3635
1123.7
RHH5298_R3664
2316.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.