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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
571.4
nTPM
FANTOM5:
214.2
Scaled Tags Per Million
Pig:
168.7
nTPM
Allen mouse:
0.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
571.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 497.7
2301
Female, age 85, both hemispheres
665.9
2090
Male, age 80, both hemispheres
534.7
2188
Female, age 91, both hemispheres
527.4
1984
Male, age 76, both hemispheres
262.9
Dorsal cochlear nucleus nTPM: 423.0
2378
Male, age 80, both hemispheres
471.3
2187
Female, age 91, both hemispheres
445.6
2370
Male, age 61, both hemispheres
422.2
2802
Male, age 74, right hemisphere
405.2
2058
Male, age 76, both hemispheres
370.7
Dorsal tegmental nucleus nTPM: 399.6
2083
Male, age 80, both hemispheres
528.7
2358
Male, age 61, both hemispheres
400.2
2326
Male, age 74, both hemispheres
373.8
1936
Male, age 76, left hemisphere
295.4
Dorsolateral tegmental area nTPM: 437.6
2337
Male, age 61, both hemispheres
725.5
2654
Male, age 80, both hemispheres
536.0
2751
Female, age 85, both hemispheres
492.2
2360
Male, age 74, both hemispheres
234.6
2141
Male, age 76, both hemispheres
199.9
Kolliker-Fuse nucleus nTPM: 453.7
2793
Female, age 91, left hemisphere
676.5
2163
Male, age 80, both hemispheres
414.6
2315
Male, age 76, right hemisphere
269.9
Lateral lemniscal nuclei nTPM: 382.7
2320
Female, age 91, left hemisphere
526.1
2169
Male, age 76, both hemispheres
421.3
2746
Female, age 85, left hemisphere
365.8
2453
Male, age 74, right hemisphere
322.5
2036
Male, age 80, both hemispheres
277.9
Lateral parabrachial nucleus nTPM: 571.4
2792
Male, age 76, both hemispheres
806.9
2790
Male, age 61, both hemispheres
647.5
2013
Male, age 80, both hemispheres
500.4
2139
Female, age 85, right hemisphere
330.7
Lateral vestibular nucleus nTPM: 482.3
2311
Male, age 80, both hemispheres
553.0
2184
Male, age 76, both hemispheres
411.7
Locus coeruleus nTPM: 179.9
2720
Male, age 74, both hemispheres
265.2
2162
Male, age 80, both hemispheres
258.1
2317
Female, age 72, unknown
194.0
2123
Female, age 91, both hemispheres
173.9
2014
Male, age 55, unknown
139.2
1980
Male, age 76, both hemispheres
120.8
2788
Male, age 74, unknown
108.3
Medial parabrachial nucleus nTPM: 505.0
2156
Male, age 61, both hemispheres
600.1
2170
Female, age 91, both hemispheres
511.1
2854
Male, age 80, both hemispheres
508.2
2463
Female, age 85, right hemisphere
485.9
2786
Male, age 76, both hemispheres
419.7
Medial periolivary nuclei nTPM: 389.4
2458
Female, age 91, both hemispheres
493.1
2081
Male, age 80, both hemispheres
460.0
2063
Male, age 76, both hemispheres
374.9
2791
Male, age 74, right hemisphere
361.5
2171
Female, age 85, both hemispheres
257.7
Motor facial nucleus nTPM: 446.3
2697
Female, age 85, both hemispheres
606.9
2126
Male, age 61, both hemispheres
547.1
2795
Female, age 91, both hemispheres
427.0
2365
Male, age 74, right hemisphere
406.9
2327
Male, age 80, both hemispheres
353.4
2062
Male, age 76, both hemispheres
336.4
Motor trigeminal nucleus nTPM: 421.8
2335
Male, age 61, both hemispheres
481.5
2321
Female, age 91, both hemispheres
470.0
2560
Male, age 74, both hemispheres
432.9
2309
Male, age 76, both hemispheres
400.7
2079
Male, age 80, both hemispheres
324.0
Nuclei of the trapezoid body nTPM: 356.1
2166
Male, age 80, both hemispheres
464.8
2368
Female, age 91, both hemispheres
424.3
1983
Male, age 76, both hemispheres
351.7
2159
Male, age 61, both hemispheres
343.7
2735
Female, age 85, both hemispheres
195.8
Nucleus raphe magnus nTPM: 348.2
2051
Male, age 76, both hemispheres
503.9
2328
Male, age 80, both hemispheres
441.6
2459
Female, age 91, both hemispheres
436.0
2455
Male, age 74, both hemispheres
312.8
2160
Male, age 61, both hemispheres
208.7
2172
Female, age 85, both hemispheres
186.4
Paramedian reticular nucleus nTPM: 384.6
2057
Male, age 80, both hemispheres
443.3
2052
Male, age 76, both hemispheres
413.7
2050
Female, age 85, both hemispheres
359.8
2313
Male, age 61, both hemispheres
321.8
Pedunculopontine tegmental nucleus nTPM: 430.7
2338
Male, age 61, both hemispheres
552.5
2334
Male, age 80, both hemispheres
442.4
1921
Female, age 85, both hemispheres
297.2
Pontine nuclei nTPM: 413.2
2319
Female, age 91, both hemispheres
546.0
2454
Male, age 74, left hemisphere
524.5
1968
Male, age 76, left hemisphere
488.2
2115
Male, age 80, left hemisphere
446.5
2109
Female, age 72, unknown
404.8
1863
Male, age 55, unknown
400.8
2787
Female, age 85, both hemispheres
255.5
2727
Male, age 61, right hemisphere
239.4
Pontine raphe nucleus nTPM: 274.2
2853
Male, age 76, midline
293.0
2122
Female, age 85, midline
255.4
Posteroventral cochlear nucleus nTPM: 495.4
2341
Male, age 80, both hemispheres
557.8
2371
Male, age 61, both hemispheres
544.6
2135
Female, age 91, both hemispheres
534.8
2070
Male, age 76, both hemispheres
532.2
2752
Female, age 85, both hemispheres
307.5
Principal sensory trigeminal nucleus nTPM: 378.2
2367
Female, age 91, left hemisphere
516.0
2324
Male, age 76, both hemispheres
410.6
2158
Male, age 61, both hemispheres
321.9
2008
Male, age 80, left hemisphere
264.2
Reticular pontine nucleus, caudal nTPM: 472.4
2457
Female, age 91, both hemispheres
565.1
2559
Male, age 74, both hemispheres
513.7
2092
Male, age 76, both hemispheres
482.2
2332
Male, age 80, right hemisphere
328.5
Reticular pontine nucleus, oral nTPM: 462.8
2366
Female, age 91, both hemispheres
573.0
1939
Male, age 80, both hemispheres
492.8
2167
Male, age 76, both hemispheres
481.1
2361
Male, age 74, both hemispheres
402.9
2012
Female, age 85, both hemispheres
364.1
Reticulotegmental nucleus nTPM: 385.8
2322
Female, age 91, both hemispheres
456.5
2333
Male, age 80, both hemispheres
437.6
2452
Male, age 74, both hemispheres
408.8
2325
Male, age 76, both hemispheres
240.4
Spinal trigeminal nucleus, oral nTPM: 401.0
2164
Male, age 80, both hemispheres
484.4
1978
Male, age 76, both hemispheres
448.7
2737
Female, age 85, both hemispheres
269.9
Subcoeruleus area nTPM: 394.8
2369
Female, age 85, left hemisphere
601.3
2089
Male, age 76, left hemisphere
381.9
1958
Male, age 80, both hemispheres
363.9
2323
Female, age 91, left hemisphere
325.9
2451
Male, age 74, both hemispheres
301.3
Superior olive nTPM: 448.0
2020
Male, age 76, both hemispheres
542.5
2561
Female, age 91, both hemispheres
518.6
2329
Male, age 80, right hemisphere
481.5
2364
Male, age 74, right hemisphere
398.6
1875
Female, age 85, both hemispheres
298.8
Ventral periolivary nuclei nTPM: 402.6
2023
Male, age 76, both hemispheres
559.1
2165
Male, age 80, both hemispheres
421.8
2794
Female, age 91, left hemisphere
346.8
2130
Female, age 85, both hemispheres
282.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 459.4
2456
Female, age 91, both hemispheres
556.2
2359
Male, age 61, both hemispheres
539.9
2840
Female, age 85, both hemispheres
444.2
1959
Male, age 76, both hemispheres
431.9
2161
Male, age 80, both hemispheres
428.6
2449
Male, age 74, both hemispheres
355.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
168.7
Pig sample
Sample description
nTPM
Pons nTPM: 168.7
Samples: 4
Max nTPM: 263.5
Min nTPM: 106.7
Sample A
Female
106.7
Sample B
Female
135.4
Sample C
Male
169.0
Sample D
Male
263.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
