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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.4
nTPM
Monaco:
126.5
nTPM
Schmiedel:
20.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.4
HPA sample
nTPM
gdT-cell nTPM: 3.9
Samples: 6
Max nTPM: 5.9
Min nTPM: 2.3
P10809_1007
2.5
P10809_1022
5.0
P10809_1041
3.9
P10809_1060
5.9
P10809_1077
2.3
P10809_1098
3.5
MAIT T-cell nTPM: 7.9
Samples: 6
Max nTPM: 13.4
Min nTPM: 4.3
P10809_1006
7.7
P10809_1024
13.4
P10809_1043
4.7
P10809_1062
4.3
P10809_1083
5.4
P10809_1097
12.1
Memory CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 60.3
Min nTPM: 27.2
P10809_1014
49.4
P10809_1026
50.9
P10809_1045
49.4
P10809_1064
27.2
P10809_1086
28.5
P10809_1113
60.3
Memory CD8 T-cell nTPM: 21.5
Samples: 5
Max nTPM: 34.5
Min nTPM: 6.1
P10809_1012
34.5
P10809_1027
11.9
P10809_1046
26.4
P10809_1065
6.1
P10809_1111
28.8
Naive CD4 T-cell nTPM: 86.4
Samples: 6
Max nTPM: 95.5
Min nTPM: 67.7
P10809_1015
75.0
P10809_1030
95.5
P10809_1049
94.1
P10809_1068
92.9
P10809_1085
67.7
P10809_1112
93.1
Naive CD8 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 121.2
Min nTPM: 5.7
P10809_1016
121.2
P10809_1031
120.3
P10809_1050
78.6
P10809_1069
46.9
P10809_1087
5.7
P10809_1110
111.1
T-reg nTPM: 19.2
Samples: 6
Max nTPM: 26.5
Min nTPM: 8.0
P10809_1018
18.7
P10809_1037
25.1
P10809_1056
26.5
P10809_1075
18.0
P10809_1094
18.6
P10809_1106
8.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.4
Samples: 4
Max nTPM: 69.2
Min nTPM: 43.9
RHH5202_R3573
51.1
RHH5230_R3602
69.2
RHH5259_R3631
43.9
RHH5288_R3660
57.4
Effector memory CD8 T-cell nTPM: 11.4
Samples: 4
Max nTPM: 20.0
Min nTPM: 3.6
RHH5203_R3574
8.1
RHH5231_R3603
3.6
RHH5260_R3632
13.7
RHH5289_R3661
20.0
MAIT T-cell nTPM: 7.3
Samples: 4
Max nTPM: 11.6
Min nTPM: 1.3
RHH5233_R3605
8.0
RHH5205_R3576
1.3
RHH5262_R3634
11.6
RHH5297_R3663
8.3
Memory CD4 T-cell TFH nTPM: 82.1
Samples: 4
Max nTPM: 101.9
Min nTPM: 68.3
RHH5300_R3666
79.2
RHH5236_R3608
78.8
RHH5265_R3637
101.9
RHH5208_R3579
68.3
Memory CD4 T-cell Th1 nTPM: 54.8
Samples: 4
Max nTPM: 62.0
Min nTPM: 48.6
RHH5210_R3581
57.5
RHH5302_R3668
62.0
RHH5238_R3610
48.6
RHH5267_R3639
51.0
Memory CD4 T-cell Th1/Th17 nTPM: 42.1
Samples: 4
Max nTPM: 48.7
Min nTPM: 36.1
RHH5303_R3669
45.6
RHH5211_R3582
37.9
RHH5239_R3611
36.1
RHH5268_R3640
48.7
Memory CD4 T-cell Th17 nTPM: 51.1
Samples: 4
Max nTPM: 62.9
Min nTPM: 44.8
RHH5304_R3670
44.8
RHH5212_R3583
62.9
RHH5240_R3612
51.5
RHH5269_R3641
45.3
Memory CD4 T-cell Th2 nTPM: 112.1
Samples: 4
Max nTPM: 135.9
Min nTPM: 90.0
RHH5305_R3671
90.0
RHH5213_R3584
123.1
RHH5241_R3613
135.9
RHH5270_R3642
99.2
Naive CD4 T-cell nTPM: 85.5
Samples: 4
Max nTPM: 97.6
Min nTPM: 78.4
RHH5306_R3672
78.4
RHH5214_R3585
86.0
RHH5242_R3614
97.6
RHH5271_R3643
79.9
Naive CD8 T-cell nTPM: 126.5
Samples: 4
Max nTPM: 158.3
Min nTPM: 85.6
RHH5201_R3572
123.0
RHH5229_R3601
85.6
RHH5258_R3630
158.3
RHH5287_R3659
138.9
Non-Vd2 gdTCR nTPM: 14.0
Samples: 4
Max nTPM: 22.9
Min nTPM: 6.8
RHH5235_R3607
7.3
RHH5264_R3636
22.9
RHH5207_R3578
6.8
RHH5299_R3665
18.9
T-reg nTPM: 57.7
Samples: 4
Max nTPM: 68.8
Min nTPM: 48.7
RHH5301_R3667
48.7
RHH5237_R3609
56.2
RHH5266_R3638
57.0
RHH5209_R3580
68.8
Terminal effector memory CD4 T-cell nTPM: 12.1
Samples: 2
Max nTPM: 20.1
Min nTPM: 4.1
RHH5243_R3615
4.1
RHH5272_R3644
20.1
Terminal effector memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 12.3
Min nTPM: 3.4
RHH5232_R3604
5.2
RHH5204_R3575
3.4
RHH5261_R3633
10.5
RHH5296_R3662
12.3
Vd2 gdTCR nTPM: 18.0
Samples: 4
Max nTPM: 25.0
Min nTPM: 2.6
RHH5234_R3606
23.0
RHH5206_R3577
2.6
RHH5263_R3635
21.5
RHH5298_R3664
25.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
