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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
499.0
nTPM
Monaco:
1226.0
nTPM
Schmiedel:
2894.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
499.0
HPA sample
nTPM
gdT-cell nTPM: 260.6
Samples: 6
Max nTPM: 308.9
Min nTPM: 192.0
P10809_1007
294.5
P10809_1022
254.6
P10809_1041
292.8
P10809_1060
192.0
P10809_1077
220.9
P10809_1098
308.9
MAIT T-cell nTPM: 461.5
Samples: 6
Max nTPM: 531.6
Min nTPM: 405.7
P10809_1006
531.6
P10809_1024
423.8
P10809_1043
441.1
P10809_1062
467.6
P10809_1083
405.7
P10809_1097
499.4
Memory CD4 T-cell nTPM: 454.7
Samples: 6
Max nTPM: 571.3
Min nTPM: 354.2
P10809_1014
571.3
P10809_1026
570.4
P10809_1045
422.3
P10809_1064
354.2
P10809_1086
356.9
P10809_1113
453.2
Memory CD8 T-cell nTPM: 344.7
Samples: 5
Max nTPM: 417.5
Min nTPM: 298.3
P10809_1012
417.5
P10809_1027
353.5
P10809_1046
353.3
P10809_1065
298.3
P10809_1111
300.8
Naive CD4 T-cell nTPM: 499.0
Samples: 6
Max nTPM: 661.2
Min nTPM: 387.3
P10809_1015
661.2
P10809_1030
549.7
P10809_1049
387.3
P10809_1068
486.2
P10809_1085
460.0
P10809_1112
449.6
Naive CD8 T-cell nTPM: 405.8
Samples: 6
Max nTPM: 670.1
Min nTPM: 247.1
P10809_1016
670.1
P10809_1031
471.9
P10809_1050
329.6
P10809_1069
345.8
P10809_1087
247.1
P10809_1110
370.1
T-reg nTPM: 430.9
Samples: 6
Max nTPM: 503.0
Min nTPM: 359.4
P10809_1018
503.0
P10809_1037
399.9
P10809_1056
405.8
P10809_1075
454.5
P10809_1094
462.9
P10809_1106
359.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1226.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1144.3
Samples: 4
Max nTPM: 1550.6
Min nTPM: 944.4
RHH5202_R3573
1030.8
RHH5230_R3602
1550.6
RHH5259_R3631
1051.3
RHH5288_R3660
944.4
Effector memory CD8 T-cell nTPM: 605.9
Samples: 4
Max nTPM: 865.0
Min nTPM: 491.7
RHH5203_R3574
865.0
RHH5231_R3603
491.7
RHH5260_R3632
517.3
RHH5289_R3661
549.7
MAIT T-cell nTPM: 1117.9
Samples: 4
Max nTPM: 1314.9
Min nTPM: 1020.7
RHH5233_R3605
1104.3
RHH5205_R3576
1314.9
RHH5262_R3634
1020.7
RHH5297_R3663
1031.8
Memory CD4 T-cell TFH nTPM: 1068.4
Samples: 4
Max nTPM: 1227.5
Min nTPM: 815.0
RHH5300_R3666
1110.9
RHH5236_R3608
815.0
RHH5265_R3637
1120.3
RHH5208_R3579
1227.5
Memory CD4 T-cell Th1 nTPM: 1158.7
Samples: 4
Max nTPM: 1328.2
Min nTPM: 1034.1
RHH5210_R3581
1165.3
RHH5302_R3668
1034.1
RHH5238_R3610
1328.2
RHH5267_R3639
1107.1
Memory CD4 T-cell Th1/Th17 nTPM: 1226.0
Samples: 4
Max nTPM: 1761.4
Min nTPM: 897.7
RHH5303_R3669
1082.0
RHH5211_R3582
897.7
RHH5239_R3611
1761.4
RHH5268_R3640
1162.8
Memory CD4 T-cell Th17 nTPM: 1203.0
Samples: 4
Max nTPM: 1393.5
Min nTPM: 895.3
RHH5304_R3670
1393.5
RHH5212_R3583
895.3
RHH5240_R3612
1162.0
RHH5269_R3641
1361.2
Memory CD4 T-cell Th2 nTPM: 1225.6
Samples: 4
Max nTPM: 1336.6
Min nTPM: 1060.2
RHH5305_R3671
1060.2
RHH5213_R3584
1190.4
RHH5241_R3613
1336.6
RHH5270_R3642
1315.3
Naive CD4 T-cell nTPM: 1216.7
Samples: 4
Max nTPM: 1414.5
Min nTPM: 974.5
RHH5306_R3672
1259.7
RHH5214_R3585
974.5
RHH5242_R3614
1414.5
RHH5271_R3643
1218.2
Naive CD8 T-cell nTPM: 1115.3
Samples: 4
Max nTPM: 1189.1
Min nTPM: 985.3
RHH5201_R3572
1189.1
RHH5229_R3601
985.3
RHH5258_R3630
1107.9
RHH5287_R3659
1179.0
Non-Vd2 gdTCR nTPM: 630.0
Samples: 4
Max nTPM: 891.9
Min nTPM: 397.8
RHH5235_R3607
891.9
RHH5264_R3636
397.8
RHH5207_R3578
641.0
RHH5299_R3665
589.2
T-reg nTPM: 1017.1
Samples: 4
Max nTPM: 1100.9
Min nTPM: 849.8
RHH5301_R3667
1096.1
RHH5237_R3609
849.8
RHH5266_R3638
1100.9
RHH5209_R3580
1021.6
Terminal effector memory CD4 T-cell nTPM: 807.3
Samples: 2
Max nTPM: 818.7
Min nTPM: 795.8
RHH5243_R3615
818.7
RHH5272_R3644
795.8
Terminal effector memory CD8 T-cell nTPM: 583.2
Samples: 4
Max nTPM: 718.5
Min nTPM: 460.1
RHH5232_R3604
718.5
RHH5204_R3575
530.1
RHH5261_R3633
460.1
RHH5296_R3662
623.9
Vd2 gdTCR nTPM: 721.1
Samples: 4
Max nTPM: 944.6
Min nTPM: 487.9
RHH5234_R3606
944.6
RHH5206_R3577
487.9
RHH5263_R3635
611.4
RHH5298_R3664
840.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
