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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.6
nTPM
Monaco:
95.3
nTPM
Schmiedel:
64.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.6
HPA sample
nTPM
gdT-cell nTPM: 59.9
Samples: 6
Max nTPM: 84.0
Min nTPM: 49.8
P10809_1007
50.4
P10809_1022
68.0
P10809_1041
84.0
P10809_1060
53.4
P10809_1077
53.8
P10809_1098
49.8
MAIT T-cell nTPM: 62.1
Samples: 6
Max nTPM: 73.1
Min nTPM: 45.3
P10809_1006
70.6
P10809_1024
73.1
P10809_1043
66.5
P10809_1062
60.5
P10809_1083
56.6
P10809_1097
45.3
Memory CD4 T-cell nTPM: 70.2
Samples: 6
Max nTPM: 75.0
Min nTPM: 65.2
P10809_1014
71.4
P10809_1026
70.9
P10809_1045
75.0
P10809_1064
65.2
P10809_1086
66.5
P10809_1113
71.9
Memory CD8 T-cell nTPM: 67.8
Samples: 5
Max nTPM: 83.4
Min nTPM: 56.3
P10809_1012
56.3
P10809_1027
67.7
P10809_1046
83.4
P10809_1065
57.2
P10809_1111
74.5
Naive CD4 T-cell nTPM: 60.3
Samples: 6
Max nTPM: 85.0
Min nTPM: 51.5
P10809_1015
52.5
P10809_1030
66.8
P10809_1049
85.0
P10809_1068
54.1
P10809_1085
51.5
P10809_1112
52.1
Naive CD8 T-cell nTPM: 61.7
Samples: 6
Max nTPM: 75.5
Min nTPM: 50.4
P10809_1016
56.2
P10809_1031
75.5
P10809_1050
57.3
P10809_1069
72.6
P10809_1087
58.4
P10809_1110
50.4
T-reg nTPM: 83.6
Samples: 6
Max nTPM: 89.8
Min nTPM: 77.5
P10809_1018
78.6
P10809_1037
77.5
P10809_1056
88.8
P10809_1075
89.5
P10809_1094
89.8
P10809_1106
77.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.0
Samples: 4
Max nTPM: 72.4
Min nTPM: 59.6
RHH5202_R3573
68.4
RHH5230_R3602
59.6
RHH5259_R3631
63.6
RHH5288_R3660
72.4
Effector memory CD8 T-cell nTPM: 95.3
Samples: 4
Max nTPM: 109.3
Min nTPM: 74.8
RHH5203_R3574
95.8
RHH5231_R3603
101.2
RHH5260_R3632
74.8
RHH5289_R3661
109.3
MAIT T-cell nTPM: 82.4
Samples: 4
Max nTPM: 111.1
Min nTPM: 64.7
RHH5233_R3605
77.9
RHH5205_R3576
75.8
RHH5262_R3634
111.1
RHH5297_R3663
64.7
Memory CD4 T-cell TFH nTPM: 76.2
Samples: 4
Max nTPM: 108.6
Min nTPM: 52.4
RHH5300_R3666
52.4
RHH5236_R3608
108.6
RHH5265_R3637
70.0
RHH5208_R3579
73.9
Memory CD4 T-cell Th1 nTPM: 52.4
Samples: 4
Max nTPM: 92.0
Min nTPM: 28.3
RHH5210_R3581
28.3
RHH5302_R3668
57.2
RHH5238_R3610
32.0
RHH5267_R3639
92.0
Memory CD4 T-cell Th1/Th17 nTPM: 71.0
Samples: 4
Max nTPM: 90.7
Min nTPM: 30.3
RHH5303_R3669
90.7
RHH5211_R3582
87.0
RHH5239_R3611
30.3
RHH5268_R3640
76.1
Memory CD4 T-cell Th17 nTPM: 79.5
Samples: 4
Max nTPM: 86.7
Min nTPM: 67.8
RHH5304_R3670
83.7
RHH5212_R3583
79.6
RHH5240_R3612
86.7
RHH5269_R3641
67.8
Memory CD4 T-cell Th2 nTPM: 94.9
Samples: 4
Max nTPM: 125.7
Min nTPM: 65.1
RHH5305_R3671
94.5
RHH5213_R3584
125.7
RHH5241_R3613
65.1
RHH5270_R3642
94.2
Naive CD4 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 72.7
Min nTPM: 42.1
RHH5306_R3672
52.4
RHH5214_R3585
58.3
RHH5242_R3614
42.1
RHH5271_R3643
72.7
Naive CD8 T-cell nTPM: 54.5
Samples: 4
Max nTPM: 70.9
Min nTPM: 11.0
RHH5201_R3572
70.6
RHH5229_R3601
11.0
RHH5258_R3630
70.9
RHH5287_R3659
65.3
Non-Vd2 gdTCR nTPM: 84.1
Samples: 4
Max nTPM: 107.9
Min nTPM: 74.2
RHH5235_R3607
74.2
RHH5264_R3636
107.9
RHH5207_R3578
75.3
RHH5299_R3665
79.0
T-reg nTPM: 85.4
Samples: 4
Max nTPM: 93.3
Min nTPM: 79.3
RHH5301_R3667
81.0
RHH5237_R3609
93.3
RHH5266_R3638
79.3
RHH5209_R3580
88.1
Terminal effector memory CD4 T-cell nTPM: 62.5
Samples: 2
Max nTPM: 84.0
Min nTPM: 41.0
RHH5243_R3615
41.0
RHH5272_R3644
84.0
Terminal effector memory CD8 T-cell nTPM: 75.0
Samples: 4
Max nTPM: 90.8
Min nTPM: 60.5
RHH5232_R3604
86.0
RHH5204_R3575
60.5
RHH5261_R3633
62.7
RHH5296_R3662
90.8
Vd2 gdTCR nTPM: 76.6
Samples: 4
Max nTPM: 96.6
Min nTPM: 58.8
RHH5234_R3606
75.7
RHH5206_R3577
96.6
RHH5263_R3635
75.4
RHH5298_R3664
58.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
