HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:8.4 nTPM
HPA Brain:32.8 nTPM
GTEx:8.4 nTPM
FANTOM5:14.9 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:64.5 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB015343
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
1911 Female, age 85, right hemisphere 35.5
2148 Female, age 91, left hemisphere 34.6
1898 Male, age 80, left hemisphere 34.0
2529 Female, age 94, left hemisphere 33.3
2621 Female, age 67, right hemisphere 31.4
1855 Male, age 76, left hemisphere 27.9
Dentate gyrus
nTPM: 32.6
2246 Female, age 85, both hemispheres 37.0
2528 Male, age 74, both hemispheres 36.1
1927 Female, age 91, both hemispheres 33.5
2010 Male, age 76, both hemispheres 33.4
2531 Female, age 67, both hemispheres 29.7
2530 Female, age 94, left hemisphere 25.8
Entorhinal gyrus
nTPM: 30.6
2117 Female, age 91, right hemisphere 35.4
1787 Male, age 76, left hemisphere 33.0
2686 Male, age 75, right hemisphere 31.9
2764 Male, age 80, right hemisphere 31.7
2613 Female, age 94, left hemisphere 26.0
1938 Female, age 85, left hemisphere 25.9
Hippocampus, CA1
nTPM: 31.9
2082 Female, age 91, right hemisphere 36.6
2527 Male, age 74, both hemispheres 35.5
2045 Male, age 76, both hemispheres 31.3
1873 Female, age 85, both hemispheres 30.5
2749 Male, age 80, left hemisphere 25.8
Hippocampus, CA2
nTPM: 31.7
2113 Female, age 91, right hemisphere 36.0
2249 Male, age 74, both hemispheres 33.5
1940 Female, age 85, left hemisphere 31.6
1963 Male, age 80, left hemisphere 31.5
1892 Male, age 76, both hemispheres 30.3
2437 Female, age 94, left hemisphere 27.4
Hippocampus, CA3
nTPM: 31.9
1891 Female, age 85, both hemispheres 40.8
2436 Male, age 74, both hemispheres 36.7
2620 Female, age 94, left hemisphere 30.7
1867 Male, age 76, both hemispheres 30.0
2861 Female, age 67, both hemispheres 27.1
2137 Male, age 80, left hemisphere 25.8
Parahippocampal cortex
nTPM: 31.8
1990 Female, age 91, right hemisphere 33.8
2245 Female, age 91, both hemispheres 33.8
1850 Male, age 80, both hemispheres 32.9
2250 Female, age 67, right hemisphere 32.5
2622 Female, age 67, right hemisphere 32.3
2018 Male, age 76, both hemispheres 31.9
2692 Male, age 74, both hemispheres 31.9
1933 Female, age 85, both hemispheres 31.5
2532 Female, age 72, left hemisphere 30.3
2693 Female, age 94, both hemispheres 27.0
Perirhinal gyrus
nTPM: 30.9
1841 Female, age 85, right hemisphere 34.1
1847 Female, age 91, left hemisphere 33.8
1794 Male, age 80, right hemisphere 31.7
2848 Male, age 76, right hemisphere 29.0
2521 Female, age 94, right hemisphere 26.1
Subiculum
nTPM: 32.3
2729 Female, age 91, right hemisphere 42.1
1977 Female, age 85, both hemispheres 31.6
2438 Female, age 94, left hemisphere 31.2
2619 Male, age 74, both hemispheres 30.5
2042 Male, age 76, both hemispheres 29.6
1901 Male, age 80, both hemispheres 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.4
Samples: 197

Max nTPM: 15.4
Min nTPM: 3.5
Std nTPM: 2.0
Median nTPM: 8.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 14.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 13.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 12.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 12.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 12.3
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 12.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 11.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 11.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 11.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 11.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.9
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 13.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.5
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 24.2
Min nTPM: 18.4
Sample A Female 24.2
Sample B Female 20.1
Sample C Male 19.2
Sample D Male 18.4
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 17.5
Sample A Female 24.2
Sample B Female 24.6
Sample C Male 17.5
Sample D Male 23.6
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.9
Sample A Female 22.8
Sample B Female 20.1
Sample C Male 19.9
Sample D Male 20.0
Ventral hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.9
Sample A Female 20.6
Sample B Female 17.9
Sample C Male 20.2
Sample D Male 21.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.5
Samples: 4

Max nTPM: 69.7
Min nTPM: 58.0
Sample A Male 58.0
Sample B Male 63.1
Sample C Female 67.2
Sample D Female 69.7
Hippocampal formation
nTPM: 64.2
Samples: 4

Max nTPM: 71.6
Min nTPM: 57.7
Sample A Male 64.4
Sample B Male 63.1
Sample C Female 71.6
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
74357621 Antisense, RP_060119_03_B03, Mouse strain C57BL/6J (56 days, male) 14.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org