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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
88.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 88.1
Samples: 152
Max nTPM: 217.6
Min nTPM: 42.7
Std nTPM: 28.9
Median nTPM: 82.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
217.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
177.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
171.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
147.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
147.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
146.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
141.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
139.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
134.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
133.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
132.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
132.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
129.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
128.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
126.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
126.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
125.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
122.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
121.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
120.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
120.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
119.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
118.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
118.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
117.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
115.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
114.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
114.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
113.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
111.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
111.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
111.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
110.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
110.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
110.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
110.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
110.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
106.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
106.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
103.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
102.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
102.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
101.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
100.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
100.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
98.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
98.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
96.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
95.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
94.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
94.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
94.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
93.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
93.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
93.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
91.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
91.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
90.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
90.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
90.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
89.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
89.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
87.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
87.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
87.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
86.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
86.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
84.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
84.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
84.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
84.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
84.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
84.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
83.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
82.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
82.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
82.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
81.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
81.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
80.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
80.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
79.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
78.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
78.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
77.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
76.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
76.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
76.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
75.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
74.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
74.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
74.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
74.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
74.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
74.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
73.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
73.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
73.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
73.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
72.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
72.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
71.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
71.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
71.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
70.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
69.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
68.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
67.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
67.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
67.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
67.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
67.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
65.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
65.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
64.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
63.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
63.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
62.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
62.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
62.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
62.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
61.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
60.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
60.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
60.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
59.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
58.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
58.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
57.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
57.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
57.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
56.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
56.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
55.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
53.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
52.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
52.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
50.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
49.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
49.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
48.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
45.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
42.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
192.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 192.3
Samples: 4
Max nTPM: 203.5
Min nTPM: 187.4
Sample A
Male
203.5
Sample B
Male
188.6
Sample C
Female
187.4
Sample D
Female
189.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.