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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
224.0
nTPM
Monaco:
127.8
nTPM
Schmiedel:
74.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
224.0
HPA sample
nTPM
gdT-cell nTPM: 165.1
Samples: 6
Max nTPM: 193.8
Min nTPM: 118.4
P10809_1007
118.4
P10809_1022
182.1
P10809_1041
193.8
P10809_1060
167.4
P10809_1077
169.6
P10809_1098
159.3
MAIT T-cell nTPM: 130.6
Samples: 6
Max nTPM: 160.9
Min nTPM: 88.2
P10809_1006
88.2
P10809_1024
160.9
P10809_1043
146.1
P10809_1062
129.5
P10809_1083
106.4
P10809_1097
152.4
Memory CD4 T-cell nTPM: 151.2
Samples: 6
Max nTPM: 192.9
Min nTPM: 107.7
P10809_1014
107.7
P10809_1026
192.9
P10809_1045
148.9
P10809_1064
157.2
P10809_1086
150.1
P10809_1113
150.4
Memory CD8 T-cell nTPM: 152.5
Samples: 5
Max nTPM: 176.0
Min nTPM: 118.0
P10809_1012
118.0
P10809_1027
167.5
P10809_1046
158.1
P10809_1065
176.0
P10809_1111
142.9
Naive CD4 T-cell nTPM: 116.8
Samples: 6
Max nTPM: 145.2
Min nTPM: 73.9
P10809_1015
73.9
P10809_1030
131.6
P10809_1049
145.2
P10809_1068
117.2
P10809_1085
112.5
P10809_1112
120.4
Naive CD8 T-cell nTPM: 129.6
Samples: 6
Max nTPM: 167.0
Min nTPM: 81.4
P10809_1016
81.4
P10809_1031
141.4
P10809_1050
121.9
P10809_1069
167.0
P10809_1087
148.8
P10809_1110
116.9
T-reg nTPM: 223.9
Samples: 6
Max nTPM: 259.1
Min nTPM: 145.2
P10809_1018
145.2
P10809_1037
243.4
P10809_1056
254.4
P10809_1075
212.0
P10809_1094
259.1
P10809_1106
229.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.0
Samples: 4
Max nTPM: 144.7
Min nTPM: 51.7
RHH5202_R3573
98.4
RHH5230_R3602
89.3
RHH5259_R3631
51.7
RHH5288_R3660
144.7
Effector memory CD8 T-cell nTPM: 123.2
Samples: 4
Max nTPM: 135.9
Min nTPM: 103.3
RHH5203_R3574
135.9
RHH5231_R3603
131.4
RHH5260_R3632
103.3
RHH5289_R3661
122.0
MAIT T-cell nTPM: 88.3
Samples: 4
Max nTPM: 116.4
Min nTPM: 66.4
RHH5233_R3605
71.2
RHH5205_R3576
66.4
RHH5262_R3634
99.0
RHH5297_R3663
116.4
Memory CD4 T-cell TFH nTPM: 125.8
Samples: 4
Max nTPM: 178.8
Min nTPM: 92.6
RHH5300_R3666
129.3
RHH5236_R3608
178.8
RHH5265_R3637
102.6
RHH5208_R3579
92.6
Memory CD4 T-cell Th1 nTPM: 100.0
Samples: 4
Max nTPM: 156.0
Min nTPM: 78.6
RHH5210_R3581
86.0
RHH5302_R3668
156.0
RHH5238_R3610
78.6
RHH5267_R3639
79.4
Memory CD4 T-cell Th1/Th17 nTPM: 109.4
Samples: 4
Max nTPM: 158.0
Min nTPM: 69.5
RHH5303_R3669
158.0
RHH5211_R3582
130.2
RHH5239_R3611
69.5
RHH5268_R3640
79.9
Memory CD4 T-cell Th17 nTPM: 99.5
Samples: 4
Max nTPM: 131.9
Min nTPM: 63.2
RHH5304_R3670
101.0
RHH5212_R3583
131.9
RHH5240_R3612
102.0
RHH5269_R3641
63.2
Memory CD4 T-cell Th2 nTPM: 111.7
Samples: 4
Max nTPM: 126.7
Min nTPM: 84.6
RHH5305_R3671
121.4
RHH5213_R3584
126.7
RHH5241_R3613
113.9
RHH5270_R3642
84.6
Naive CD4 T-cell nTPM: 81.2
Samples: 4
Max nTPM: 117.8
Min nTPM: 57.2
RHH5306_R3672
85.8
RHH5214_R3585
117.8
RHH5242_R3614
64.0
RHH5271_R3643
57.2
Naive CD8 T-cell nTPM: 63.8
Samples: 4
Max nTPM: 72.5
Min nTPM: 54.2
RHH5201_R3572
72.5
RHH5229_R3601
58.5
RHH5258_R3630
70.0
RHH5287_R3659
54.2
Non-Vd2 gdTCR nTPM: 120.3
Samples: 4
Max nTPM: 136.4
Min nTPM: 75.3
RHH5235_R3607
75.3
RHH5264_R3636
134.4
RHH5207_R3578
136.4
RHH5299_R3665
135.1
T-reg nTPM: 127.8
Samples: 4
Max nTPM: 171.0
Min nTPM: 83.3
RHH5301_R3667
171.0
RHH5237_R3609
141.0
RHH5266_R3638
83.3
RHH5209_R3580
115.7
Terminal effector memory CD4 T-cell nTPM: 99.5
Samples: 2
Max nTPM: 108.5
Min nTPM: 90.5
RHH5243_R3615
90.5
RHH5272_R3644
108.5
Terminal effector memory CD8 T-cell nTPM: 122.4
Samples: 4
Max nTPM: 136.0
Min nTPM: 108.1
RHH5232_R3604
108.1
RHH5204_R3575
132.1
RHH5261_R3633
113.5
RHH5296_R3662
136.0
Vd2 gdTCR nTPM: 105.6
Samples: 4
Max nTPM: 143.4
Min nTPM: 78.2
RHH5234_R3606
78.2
RHH5206_R3577
143.4
RHH5263_R3635
78.6
RHH5298_R3664
122.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
