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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
220.5
nTPM
Monaco:
153.5
nTPM
Schmiedel:
42.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
220.5
HPA sample
nTPM
gdT-cell nTPM: 220.5
Samples: 6
Max nTPM: 360.1
Min nTPM: 82.9
P10809_1007
82.9
P10809_1022
205.4
P10809_1041
360.1
P10809_1060
200.3
P10809_1077
212.7
P10809_1098
261.6
MAIT T-cell nTPM: 126.2
Samples: 6
Max nTPM: 168.5
Min nTPM: 56.5
P10809_1006
56.5
P10809_1024
135.1
P10809_1043
150.2
P10809_1062
168.5
P10809_1083
85.5
P10809_1097
161.3
Memory CD4 T-cell nTPM: 140.6
Samples: 6
Max nTPM: 264.7
Min nTPM: 49.3
P10809_1014
49.3
P10809_1026
102.4
P10809_1045
104.4
P10809_1064
264.7
P10809_1086
187.8
P10809_1113
134.7
Memory CD8 T-cell nTPM: 117.7
Samples: 5
Max nTPM: 170.8
Min nTPM: 48.1
P10809_1012
48.1
P10809_1027
110.0
P10809_1046
144.6
P10809_1065
170.8
P10809_1111
115.0
Naive CD4 T-cell nTPM: 94.5
Samples: 6
Max nTPM: 143.3
Min nTPM: 35.1
P10809_1015
35.1
P10809_1030
89.6
P10809_1049
90.1
P10809_1068
112.2
P10809_1085
143.3
P10809_1112
96.4
Naive CD8 T-cell nTPM: 107.5
Samples: 6
Max nTPM: 148.2
Min nTPM: 48.6
P10809_1016
48.6
P10809_1031
96.6
P10809_1050
123.5
P10809_1069
148.2
P10809_1087
132.6
P10809_1110
95.3
T-reg nTPM: 102.7
Samples: 6
Max nTPM: 131.5
Min nTPM: 68.8
P10809_1018
68.8
P10809_1037
75.0
P10809_1056
131.5
P10809_1075
94.5
P10809_1094
124.9
P10809_1106
121.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.9
Samples: 4
Max nTPM: 51.4
Min nTPM: 25.3
RHH5202_R3573
44.7
RHH5230_R3602
46.3
RHH5259_R3631
25.3
RHH5288_R3660
51.4
Effector memory CD8 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 86.9
Min nTPM: 40.2
RHH5203_R3574
40.2
RHH5231_R3603
57.6
RHH5260_R3632
47.1
RHH5289_R3661
86.9
MAIT T-cell nTPM: 64.1
Samples: 4
Max nTPM: 89.3
Min nTPM: 37.2
RHH5233_R3605
72.5
RHH5205_R3576
37.2
RHH5262_R3634
57.2
RHH5297_R3663
89.3
Memory CD4 T-cell TFH nTPM: 59.7
Samples: 4
Max nTPM: 86.6
Min nTPM: 26.5
RHH5300_R3666
60.1
RHH5236_R3608
86.6
RHH5265_R3637
26.5
RHH5208_R3579
65.5
Memory CD4 T-cell Th1 nTPM: 54.9
Samples: 4
Max nTPM: 75.4
Min nTPM: 37.9
RHH5210_R3581
60.2
RHH5302_R3668
75.4
RHH5238_R3610
46.1
RHH5267_R3639
37.9
Memory CD4 T-cell Th1/Th17 nTPM: 61.9
Samples: 4
Max nTPM: 104.5
Min nTPM: 33.9
RHH5303_R3669
104.5
RHH5211_R3582
74.7
RHH5239_R3611
33.9
RHH5268_R3640
34.5
Memory CD4 T-cell Th17 nTPM: 50.7
Samples: 4
Max nTPM: 79.2
Min nTPM: 29.2
RHH5304_R3670
47.7
RHH5212_R3583
79.2
RHH5240_R3612
46.5
RHH5269_R3641
29.2
Memory CD4 T-cell Th2 nTPM: 41.8
Samples: 4
Max nTPM: 54.6
Min nTPM: 28.2
RHH5305_R3671
37.3
RHH5213_R3584
47.1
RHH5241_R3613
54.6
RHH5270_R3642
28.2
Naive CD4 T-cell nTPM: 41.5
Samples: 4
Max nTPM: 50.4
Min nTPM: 32.2
RHH5306_R3672
44.5
RHH5214_R3585
50.4
RHH5242_R3614
38.8
RHH5271_R3643
32.2
Naive CD8 T-cell nTPM: 37.7
Samples: 4
Max nTPM: 52.5
Min nTPM: 17.3
RHH5201_R3572
44.1
RHH5229_R3601
17.3
RHH5258_R3630
52.5
RHH5287_R3659
36.8
Non-Vd2 gdTCR nTPM: 114.3
Samples: 4
Max nTPM: 179.8
Min nTPM: 77.5
RHH5235_R3607
86.0
RHH5264_R3636
114.0
RHH5207_R3578
77.5
RHH5299_R3665
179.8
T-reg nTPM: 46.0
Samples: 4
Max nTPM: 67.9
Min nTPM: 24.7
RHH5301_R3667
50.2
RHH5237_R3609
67.9
RHH5266_R3638
24.7
RHH5209_R3580
41.3
Terminal effector memory CD4 T-cell nTPM: 153.6
Samples: 2
Max nTPM: 164.3
Min nTPM: 142.8
RHH5243_R3615
164.3
RHH5272_R3644
142.8
Terminal effector memory CD8 T-cell nTPM: 128.8
Samples: 4
Max nTPM: 185.8
Min nTPM: 86.7
RHH5232_R3604
120.2
RHH5204_R3575
86.7
RHH5261_R3633
122.4
RHH5296_R3662
185.8
Vd2 gdTCR nTPM: 79.1
Samples: 4
Max nTPM: 132.9
Min nTPM: 42.0
RHH5234_R3606
65.1
RHH5206_R3577
132.9
RHH5263_R3635
42.0
RHH5298_R3664
76.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
