HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:107.7 nTPM
HPA Brain:115.3 nTPM
GTEx:107.7 nTPM
FANTOM5:184.0 Scaled Tags Per Million
Pig:70.4 nTPM
Mouse:186.3 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045211Antibody HPA075051
Glial cells Not detectedMedium
Neuronal cells LowMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.3
Sample id Sample description nTPM
Hippocampus
nTPM: 98.2
1898 Male, age 80, left hemisphere 130.0
2529 Female, age 94, left hemisphere 99.5
2148 Female, age 91, left hemisphere 97.3
2621 Female, age 67, right hemisphere 91.2
1855 Male, age 76, left hemisphere 88.1
1911 Female, age 85, right hemisphere 83.4
Dentate gyrus
nTPM: 96.0
2010 Male, age 76, both hemispheres 108.2
1927 Female, age 91, both hemispheres 107.6
2530 Female, age 94, left hemisphere 105.8
2528 Male, age 74, both hemispheres 97.8
2246 Female, age 85, both hemispheres 84.5
2531 Female, age 67, both hemispheres 72.0
Entorhinal gyrus
nTPM: 107.2
2764 Male, age 80, right hemisphere 133.5
1938 Female, age 85, left hemisphere 109.5
1787 Male, age 76, left hemisphere 104.7
2117 Female, age 91, right hemisphere 101.7
2686 Male, age 75, right hemisphere 98.1
2613 Female, age 94, left hemisphere 95.9
Hippocampus, CA1
nTPM: 111.2
2749 Male, age 80, left hemisphere 160.4
1873 Female, age 85, both hemispheres 105.7
2527 Male, age 74, both hemispheres 103.5
2082 Female, age 91, right hemisphere 96.2
2045 Male, age 76, both hemispheres 90.0
Hippocampus, CA2
nTPM: 107.2
1963 Male, age 80, left hemisphere 130.2
1892 Male, age 76, both hemispheres 122.4
2249 Male, age 74, both hemispheres 115.4
2113 Female, age 91, right hemisphere 93.3
1940 Female, age 85, left hemisphere 93.2
2437 Female, age 94, left hemisphere 88.9
Hippocampus, CA3
nTPM: 104.3
2436 Male, age 74, both hemispheres 133.2
2137 Male, age 80, left hemisphere 115.7
1867 Male, age 76, both hemispheres 109.9
1891 Female, age 85, both hemispheres 94.7
2620 Female, age 94, left hemisphere 94.6
2861 Female, age 67, both hemispheres 77.5
Parahippocampal cortex
nTPM: 101.4
1850 Male, age 80, both hemispheres 124.8
1990 Female, age 91, right hemisphere 112.9
2250 Female, age 67, right hemisphere 106.1
1933 Female, age 85, both hemispheres 104.5
2245 Female, age 91, both hemispheres 102.7
2532 Female, age 72, left hemisphere 96.7
2692 Male, age 74, both hemispheres 94.6
2018 Male, age 76, both hemispheres 93.8
2622 Female, age 67, right hemisphere 91.8
2693 Female, age 94, both hemispheres 86.0
Perirhinal gyrus
nTPM: 115.3
1847 Female, age 91, left hemisphere 136.0
1794 Male, age 80, right hemisphere 131.4
1841 Female, age 85, right hemisphere 111.4
2848 Male, age 76, right hemisphere 100.9
2521 Female, age 94, right hemisphere 96.9
Subiculum
nTPM: 95.7
1901 Male, age 80, both hemispheres 111.6
1977 Female, age 85, both hemispheres 110.5
2619 Male, age 74, both hemispheres 100.6
2042 Male, age 76, both hemispheres 92.5
2729 Female, age 91, right hemisphere 88.0
2438 Female, age 94, left hemisphere 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.7
Samples: 197

Max nTPM: 191.4
Min nTPM: 42.6
Std nTPM: 25.4
Median nTPM: 102.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 191.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 175.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 173.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 172.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 163.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 156.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 156.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 155.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 154.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 153.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 150.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 184.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.0
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 141.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.4
Pig sample Sample description nTPM
Subiculum
nTPM: 58.1
Samples: 4

Max nTPM: 76.8
Min nTPM: 47.8
Sample A Female 76.8
Sample B Female 51.8
Sample C Male 55.9
Sample D Male 47.8
Dorsal hippocampus
nTPM: 70.4
Samples: 4

Max nTPM: 96.6
Min nTPM: 50.8
Sample A Female 96.6
Sample B Female 66.7
Sample C Male 67.4
Sample D Male 50.8
Entorhinal cortex
nTPM: 60.8
Samples: 4

Max nTPM: 71.3
Min nTPM: 48.8
Sample A Female 65.1
Sample B Female 71.3
Sample C Male 58.1
Sample D Male 48.8
Ventral hippocampus
nTPM: 68.0
Samples: 4

Max nTPM: 82.4
Min nTPM: 43.0
Sample A Female 74.0
Sample B Female 43.0
Sample C Male 82.4
Sample D Male 72.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 184.1
Samples: 4

Max nTPM: 191.5
Min nTPM: 178.2
Sample A Male 178.2
Sample B Male 191.5
Sample C Female 186.6
Sample D Female 180.0
Hippocampal formation
nTPM: 186.3
Samples: 4

Max nTPM: 193.8
Min nTPM: 175.5
Sample A Male 193.8
Sample B Male 175.5
Sample C Female 189.0
Sample D Female 187.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
69015572 Antisense, RP_050315_01_C05, Mouse strain C57BL/6J (56 days, male) 11.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org