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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
298.6
nTPM
Monaco:
231.3
nTPM
Schmiedel:
53.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
298.6
HPA sample
nTPM
gdT-cell nTPM: 298.6
Samples: 6
Max nTPM: 361.3
Min nTPM: 204.3
P10809_1007
204.3
P10809_1022
338.3
P10809_1041
361.3
P10809_1060
251.8
P10809_1077
310.7
P10809_1098
325.3
MAIT T-cell nTPM: 262.1
Samples: 6
Max nTPM: 362.2
Min nTPM: 165.1
P10809_1006
165.1
P10809_1024
218.6
P10809_1043
294.3
P10809_1062
245.0
P10809_1083
287.3
P10809_1097
362.2
Memory CD4 T-cell nTPM: 222.1
Samples: 6
Max nTPM: 295.0
Min nTPM: 157.9
P10809_1014
157.9
P10809_1026
295.0
P10809_1045
207.1
P10809_1064
208.2
P10809_1086
214.5
P10809_1113
250.0
Memory CD8 T-cell nTPM: 267.8
Samples: 5
Max nTPM: 310.2
Min nTPM: 197.6
P10809_1012
197.6
P10809_1027
289.9
P10809_1046
310.2
P10809_1065
250.0
P10809_1111
291.2
Naive CD4 T-cell nTPM: 117.8
Samples: 6
Max nTPM: 164.3
Min nTPM: 79.9
P10809_1015
79.9
P10809_1030
112.7
P10809_1049
141.8
P10809_1068
89.9
P10809_1085
164.3
P10809_1112
118.3
Naive CD8 T-cell nTPM: 176.8
Samples: 6
Max nTPM: 268.9
Min nTPM: 99.6
P10809_1016
99.6
P10809_1031
122.0
P10809_1050
187.6
P10809_1069
227.2
P10809_1087
268.9
P10809_1110
155.6
T-reg nTPM: 292.0
Samples: 6
Max nTPM: 405.6
Min nTPM: 198.4
P10809_1018
198.4
P10809_1037
270.5
P10809_1056
405.6
P10809_1075
313.8
P10809_1094
260.3
P10809_1106
303.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
231.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.7
Samples: 4
Max nTPM: 139.3
Min nTPM: 82.7
RHH5202_R3573
123.0
RHH5230_R3602
101.8
RHH5259_R3631
82.7
RHH5288_R3660
139.3
Effector memory CD8 T-cell nTPM: 159.0
Samples: 4
Max nTPM: 187.1
Min nTPM: 131.4
RHH5203_R3574
181.9
RHH5231_R3603
187.1
RHH5260_R3632
135.7
RHH5289_R3661
131.4
MAIT T-cell nTPM: 150.6
Samples: 4
Max nTPM: 182.1
Min nTPM: 124.4
RHH5233_R3605
145.3
RHH5205_R3576
124.4
RHH5262_R3634
150.4
RHH5297_R3663
182.1
Memory CD4 T-cell TFH nTPM: 130.1
Samples: 4
Max nTPM: 193.1
Min nTPM: 94.5
RHH5300_R3666
113.0
RHH5236_R3608
193.1
RHH5265_R3637
94.5
RHH5208_R3579
119.9
Memory CD4 T-cell Th1 nTPM: 124.0
Samples: 4
Max nTPM: 204.8
Min nTPM: 78.7
RHH5210_R3581
105.5
RHH5302_R3668
204.8
RHH5238_R3610
78.7
RHH5267_R3639
106.8
Memory CD4 T-cell Th1/Th17 nTPM: 121.5
Samples: 4
Max nTPM: 195.4
Min nTPM: 75.1
RHH5303_R3669
195.4
RHH5211_R3582
122.6
RHH5239_R3611
75.1
RHH5268_R3640
92.9
Memory CD4 T-cell Th17 nTPM: 105.8
Samples: 4
Max nTPM: 123.6
Min nTPM: 88.6
RHH5304_R3670
123.6
RHH5212_R3583
112.1
RHH5240_R3612
88.6
RHH5269_R3641
98.9
Memory CD4 T-cell Th2 nTPM: 156.4
Samples: 4
Max nTPM: 179.5
Min nTPM: 122.7
RHH5305_R3671
164.4
RHH5213_R3584
179.5
RHH5241_R3613
158.8
RHH5270_R3642
122.7
Naive CD4 T-cell nTPM: 76.2
Samples: 4
Max nTPM: 120.7
Min nTPM: 48.6
RHH5306_R3672
83.8
RHH5214_R3585
120.7
RHH5242_R3614
51.5
RHH5271_R3643
48.6
Naive CD8 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 86.2
Min nTPM: 61.8
RHH5201_R3572
63.6
RHH5229_R3601
61.8
RHH5258_R3630
86.2
RHH5287_R3659
68.0
Non-Vd2 gdTCR nTPM: 206.4
Samples: 4
Max nTPM: 278.2
Min nTPM: 139.9
RHH5235_R3607
139.9
RHH5264_R3636
246.6
RHH5207_R3578
160.8
RHH5299_R3665
278.2
T-reg nTPM: 119.4
Samples: 4
Max nTPM: 156.7
Min nTPM: 79.0
RHH5301_R3667
156.5
RHH5237_R3609
156.7
RHH5266_R3638
79.0
RHH5209_R3580
85.3
Terminal effector memory CD4 T-cell nTPM: 151.8
Samples: 2
Max nTPM: 219.4
Min nTPM: 84.2
RHH5243_R3615
84.2
RHH5272_R3644
219.4
Terminal effector memory CD8 T-cell nTPM: 231.3
Samples: 4
Max nTPM: 319.4
Min nTPM: 166.2
RHH5232_R3604
166.2
RHH5204_R3575
319.4
RHH5261_R3633
204.1
RHH5296_R3662
235.3
Vd2 gdTCR nTPM: 208.2
Samples: 4
Max nTPM: 282.8
Min nTPM: 144.9
RHH5234_R3606
144.9
RHH5206_R3577
282.8
RHH5263_R3635
147.3
RHH5298_R3664
257.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
