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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
699.4
nTPM
Monaco:
179.8
nTPM
Schmiedel:
124.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
699.4
HPA sample
nTPM
gdT-cell nTPM: 437.3
Samples: 6
Max nTPM: 620.9
Min nTPM: 213.6
P10809_1007
213.6
P10809_1022
481.6
P10809_1041
620.9
P10809_1060
359.1
P10809_1077
409.7
P10809_1098
538.6
MAIT T-cell nTPM: 461.6
Samples: 6
Max nTPM: 609.3
Min nTPM: 182.9
P10809_1006
182.9
P10809_1024
547.0
P10809_1043
553.7
P10809_1062
493.3
P10809_1083
383.3
P10809_1097
609.3
Memory CD4 T-cell nTPM: 591.5
Samples: 6
Max nTPM: 780.0
Min nTPM: 305.1
P10809_1014
305.1
P10809_1026
780.0
P10809_1045
683.6
P10809_1064
544.2
P10809_1086
545.0
P10809_1113
691.3
Memory CD8 T-cell nTPM: 446.3
Samples: 5
Max nTPM: 559.3
Min nTPM: 228.6
P10809_1012
228.6
P10809_1027
445.0
P10809_1046
527.3
P10809_1065
471.1
P10809_1111
559.3
Naive CD4 T-cell nTPM: 596.7
Samples: 6
Max nTPM: 950.3
Min nTPM: 229.7
P10809_1015
229.7
P10809_1030
704.8
P10809_1049
950.3
P10809_1068
523.5
P10809_1085
556.8
P10809_1112
615.0
Naive CD8 T-cell nTPM: 462.4
Samples: 6
Max nTPM: 603.8
Min nTPM: 267.3
P10809_1016
267.3
P10809_1031
603.8
P10809_1050
484.4
P10809_1069
474.8
P10809_1087
356.6
P10809_1110
587.7
T-reg nTPM: 699.4
Samples: 6
Max nTPM: 1009.8
Min nTPM: 342.4
P10809_1018
342.4
P10809_1037
671.8
P10809_1056
1009.8
P10809_1075
673.3
P10809_1094
677.8
P10809_1106
821.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 114.8
Samples: 4
Max nTPM: 176.1
Min nTPM: 45.8
RHH5202_R3573
141.6
RHH5230_R3602
45.8
RHH5259_R3631
95.6
RHH5288_R3660
176.1
Effector memory CD8 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 101.7
Min nTPM: 41.9
RHH5203_R3574
101.7
RHH5231_R3603
41.9
RHH5260_R3632
59.1
RHH5289_R3661
76.7
MAIT T-cell nTPM: 114.0
Samples: 4
Max nTPM: 202.6
Min nTPM: 72.8
RHH5233_R3605
72.8
RHH5205_R3576
90.4
RHH5262_R3634
90.1
RHH5297_R3663
202.6
Memory CD4 T-cell TFH nTPM: 179.8
Samples: 4
Max nTPM: 208.6
Min nTPM: 135.1
RHH5300_R3666
183.8
RHH5236_R3608
208.6
RHH5265_R3637
135.1
RHH5208_R3579
191.7
Memory CD4 T-cell Th1 nTPM: 146.2
Samples: 4
Max nTPM: 236.2
Min nTPM: 62.0
RHH5210_R3581
173.1
RHH5302_R3668
236.2
RHH5238_R3610
62.0
RHH5267_R3639
113.6
Memory CD4 T-cell Th1/Th17 nTPM: 169.5
Samples: 4
Max nTPM: 269.5
Min nTPM: 55.8
RHH5303_R3669
269.5
RHH5211_R3582
231.6
RHH5239_R3611
55.8
RHH5268_R3640
121.0
Memory CD4 T-cell Th17 nTPM: 109.8
Samples: 4
Max nTPM: 205.2
Min nTPM: 43.3
RHH5304_R3670
114.3
RHH5212_R3583
205.2
RHH5240_R3612
43.3
RHH5269_R3641
76.3
Memory CD4 T-cell Th2 nTPM: 126.0
Samples: 4
Max nTPM: 153.0
Min nTPM: 107.2
RHH5305_R3671
153.0
RHH5213_R3584
133.4
RHH5241_R3613
110.5
RHH5270_R3642
107.2
Naive CD4 T-cell nTPM: 130.0
Samples: 4
Max nTPM: 225.6
Min nTPM: 66.5
RHH5306_R3672
130.2
RHH5214_R3585
225.6
RHH5242_R3614
66.5
RHH5271_R3643
97.5
Naive CD8 T-cell nTPM: 114.5
Samples: 4
Max nTPM: 172.2
Min nTPM: 33.9
RHH5201_R3572
154.5
RHH5229_R3601
33.9
RHH5258_R3630
172.2
RHH5287_R3659
97.2
Non-Vd2 gdTCR nTPM: 107.0
Samples: 4
Max nTPM: 158.5
Min nTPM: 31.2
RHH5235_R3607
31.2
RHH5264_R3636
131.7
RHH5207_R3578
106.4
RHH5299_R3665
158.5
T-reg nTPM: 159.7
Samples: 4
Max nTPM: 228.5
Min nTPM: 112.4
RHH5301_R3667
228.5
RHH5237_R3609
140.1
RHH5266_R3638
112.4
RHH5209_R3580
157.8
Terminal effector memory CD4 T-cell nTPM: 74.0
Samples: 2
Max nTPM: 139.5
Min nTPM: 8.5
RHH5243_R3615
8.5
RHH5272_R3644
139.5
Terminal effector memory CD8 T-cell nTPM: 124.6
Samples: 4
Max nTPM: 196.5
Min nTPM: 59.2
RHH5232_R3604
59.2
RHH5204_R3575
196.5
RHH5261_R3633
102.8
RHH5296_R3662
140.0
Vd2 gdTCR nTPM: 167.6
Samples: 4
Max nTPM: 258.3
Min nTPM: 57.6
RHH5234_R3606
57.6
RHH5206_R3577
258.3
RHH5263_R3635
97.8
RHH5298_R3664
256.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
