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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
226.9
nTPM
Monaco:
449.7
nTPM
Schmiedel:
98.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.9
HPA sample
nTPM
gdT-cell nTPM: 226.9
Samples: 6
Max nTPM: 282.1
Min nTPM: 185.9
P10809_1007
221.9
P10809_1022
217.1
P10809_1041
282.1
P10809_1060
185.9
P10809_1077
187.8
P10809_1098
266.6
MAIT T-cell nTPM: 48.4
Samples: 6
Max nTPM: 79.6
Min nTPM: 30.1
P10809_1006
40.8
P10809_1024
79.6
P10809_1043
41.1
P10809_1062
30.1
P10809_1083
38.1
P10809_1097
60.5
Memory CD4 T-cell nTPM: 45.7
Samples: 6
Max nTPM: 85.9
Min nTPM: 15.2
P10809_1014
40.4
P10809_1026
15.2
P10809_1045
43.4
P10809_1064
65.3
P10809_1086
85.9
P10809_1113
23.8
Memory CD8 T-cell nTPM: 67.5
Samples: 5
Max nTPM: 91.9
Min nTPM: 45.6
P10809_1012
51.9
P10809_1027
45.6
P10809_1046
91.9
P10809_1065
74.2
P10809_1111
73.9
Naive CD4 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 51.1
Min nTPM: 5.3
P10809_1015
11.3
P10809_1030
5.3
P10809_1049
18.9
P10809_1068
7.6
P10809_1085
51.1
P10809_1112
6.4
Naive CD8 T-cell nTPM: 52.6
Samples: 6
Max nTPM: 98.3
Min nTPM: 19.0
P10809_1016
19.0
P10809_1031
21.0
P10809_1050
84.2
P10809_1069
58.7
P10809_1087
98.3
P10809_1110
34.3
T-reg nTPM: 3.1
Samples: 6
Max nTPM: 6.2
Min nTPM: 0.3
P10809_1018
2.9
P10809_1037
0.3
P10809_1056
6.2
P10809_1075
3.3
P10809_1094
3.5
P10809_1106
2.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.8
Samples: 4
Max nTPM: 106.1
Min nTPM: 47.3
RHH5202_R3573
48.0
RHH5230_R3602
65.8
RHH5259_R3631
47.3
RHH5288_R3660
106.1
Effector memory CD8 T-cell nTPM: 202.6
Samples: 4
Max nTPM: 276.1
Min nTPM: 136.2
RHH5203_R3574
234.2
RHH5231_R3603
164.0
RHH5260_R3632
136.2
RHH5289_R3661
276.1
MAIT T-cell nTPM: 117.5
Samples: 4
Max nTPM: 198.4
Min nTPM: 63.6
RHH5233_R3605
63.6
RHH5205_R3576
198.4
RHH5262_R3634
89.5
RHH5297_R3663
118.5
Memory CD4 T-cell TFH nTPM: 35.1
Samples: 4
Max nTPM: 38.2
Min nTPM: 30.4
RHH5300_R3666
38.2
RHH5236_R3608
30.4
RHH5265_R3637
33.5
RHH5208_R3579
38.2
Memory CD4 T-cell Th1 nTPM: 81.7
Samples: 4
Max nTPM: 88.8
Min nTPM: 66.9
RHH5210_R3581
86.6
RHH5302_R3668
66.9
RHH5238_R3610
88.8
RHH5267_R3639
84.3
Memory CD4 T-cell Th1/Th17 nTPM: 100.6
Samples: 4
Max nTPM: 134.9
Min nTPM: 66.8
RHH5303_R3669
109.8
RHH5211_R3582
134.9
RHH5239_R3611
90.8
RHH5268_R3640
66.8
Memory CD4 T-cell Th17 nTPM: 43.0
Samples: 4
Max nTPM: 60.4
Min nTPM: 34.3
RHH5304_R3670
60.4
RHH5212_R3583
37.3
RHH5240_R3612
39.8
RHH5269_R3641
34.3
Memory CD4 T-cell Th2 nTPM: 61.7
Samples: 4
Max nTPM: 75.2
Min nTPM: 36.9
RHH5305_R3671
75.2
RHH5213_R3584
66.4
RHH5241_R3613
36.9
RHH5270_R3642
68.1
Naive CD4 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 38.4
Min nTPM: 6.2
RHH5306_R3672
12.1
RHH5214_R3585
26.5
RHH5242_R3614
38.4
RHH5271_R3643
6.2
Naive CD8 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 10.9
Min nTPM: 5.4
RHH5201_R3572
5.6
RHH5229_R3601
5.4
RHH5258_R3630
6.8
RHH5287_R3659
10.9
Non-Vd2 gdTCR nTPM: 412.0
Samples: 4
Max nTPM: 725.6
Min nTPM: 233.8
RHH5235_R3607
443.1
RHH5264_R3636
233.8
RHH5207_R3578
725.6
RHH5299_R3665
245.3
T-reg nTPM: 17.3
Samples: 4
Max nTPM: 18.2
Min nTPM: 16.1
RHH5301_R3667
17.6
RHH5237_R3609
17.2
RHH5266_R3638
16.1
RHH5209_R3580
18.2
Terminal effector memory CD4 T-cell nTPM: 320.1
Samples: 2
Max nTPM: 410.5
Min nTPM: 229.7
RHH5243_R3615
410.5
RHH5272_R3644
229.7
Terminal effector memory CD8 T-cell nTPM: 372.5
Samples: 4
Max nTPM: 452.1
Min nTPM: 281.7
RHH5232_R3604
370.9
RHH5204_R3575
452.1
RHH5261_R3633
385.2
RHH5296_R3662
281.7
Vd2 gdTCR nTPM: 449.7
Samples: 4
Max nTPM: 699.2
Min nTPM: 312.7
RHH5234_R3606
392.1
RHH5206_R3577
699.2
RHH5263_R3635
394.6
RHH5298_R3664
312.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
