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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.4
nTPM
Monaco:
26.0
nTPM
Schmiedel:
78.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.4
HPA sample
nTPM
gdT-cell nTPM: 30.9
Samples: 6
Max nTPM: 36.4
Min nTPM: 26.4
P10809_1007
26.4
P10809_1022
31.3
P10809_1041
31.8
P10809_1060
36.4
P10809_1077
28.8
P10809_1098
30.6
MAIT T-cell nTPM: 27.2
Samples: 6
Max nTPM: 42.0
Min nTPM: 19.7
P10809_1006
24.8
P10809_1024
42.0
P10809_1043
24.9
P10809_1062
30.5
P10809_1083
21.0
P10809_1097
19.7
Memory CD4 T-cell nTPM: 38.1
Samples: 6
Max nTPM: 46.0
Min nTPM: 33.5
P10809_1014
33.5
P10809_1026
46.0
P10809_1045
39.1
P10809_1064
37.7
P10809_1086
33.5
P10809_1113
38.8
Memory CD8 T-cell nTPM: 31.4
Samples: 5
Max nTPM: 35.7
Min nTPM: 25.6
P10809_1012
32.8
P10809_1027
31.1
P10809_1046
31.7
P10809_1065
25.6
P10809_1111
35.7
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 33.4
Min nTPM: 22.3
P10809_1015
25.2
P10809_1030
29.3
P10809_1049
33.4
P10809_1068
25.1
P10809_1085
22.3
P10809_1112
32.0
Naive CD8 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 33.0
Min nTPM: 29.1
P10809_1016
29.1
P10809_1031
29.8
P10809_1050
31.2
P10809_1069
33.0
P10809_1087
32.8
P10809_1110
31.3
T-reg nTPM: 67.4
Samples: 6
Max nTPM: 90.5
Min nTPM: 47.6
P10809_1018
47.6
P10809_1037
62.1
P10809_1056
86.6
P10809_1075
55.8
P10809_1094
90.5
P10809_1106
61.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 22.7
Min nTPM: 11.3
RHH5202_R3573
18.8
RHH5230_R3602
11.3
RHH5259_R3631
13.6
RHH5288_R3660
22.7
Effector memory CD8 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 14.8
Min nTPM: 7.5
RHH5203_R3574
12.8
RHH5231_R3603
14.8
RHH5260_R3632
13.3
RHH5289_R3661
7.5
MAIT T-cell nTPM: 12.0
Samples: 4
Max nTPM: 20.7
Min nTPM: 5.9
RHH5233_R3605
8.2
RHH5205_R3576
5.9
RHH5262_R3634
13.2
RHH5297_R3663
20.7
Memory CD4 T-cell TFH nTPM: 21.8
Samples: 4
Max nTPM: 25.4
Min nTPM: 18.1
RHH5300_R3666
24.3
RHH5236_R3608
25.4
RHH5265_R3637
19.3
RHH5208_R3579
18.1
Memory CD4 T-cell Th1 nTPM: 21.1
Samples: 4
Max nTPM: 35.3
Min nTPM: 14.9
RHH5210_R3581
19.2
RHH5302_R3668
35.3
RHH5238_R3610
14.9
RHH5267_R3639
15.0
Memory CD4 T-cell Th1/Th17 nTPM: 16.1
Samples: 4
Max nTPM: 20.8
Min nTPM: 11.6
RHH5303_R3669
20.8
RHH5211_R3582
17.8
RHH5239_R3611
11.6
RHH5268_R3640
14.3
Memory CD4 T-cell Th17 nTPM: 15.5
Samples: 4
Max nTPM: 23.0
Min nTPM: 7.3
RHH5304_R3670
22.4
RHH5212_R3583
23.0
RHH5240_R3612
9.4
RHH5269_R3641
7.3
Memory CD4 T-cell Th2 nTPM: 23.8
Samples: 4
Max nTPM: 29.1
Min nTPM: 15.2
RHH5305_R3671
29.1
RHH5213_R3584
24.5
RHH5241_R3613
26.3
RHH5270_R3642
15.2
Naive CD4 T-cell nTPM: 19.9
Samples: 4
Max nTPM: 31.2
Min nTPM: 9.1
RHH5306_R3672
21.6
RHH5214_R3585
31.2
RHH5242_R3614
9.1
RHH5271_R3643
17.8
Naive CD8 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 21.7
Min nTPM: 9.7
RHH5201_R3572
18.6
RHH5229_R3601
9.7
RHH5258_R3630
21.7
RHH5287_R3659
15.1
Non-Vd2 gdTCR nTPM: 10.8
Samples: 4
Max nTPM: 19.5
Min nTPM: 4.3
RHH5235_R3607
4.3
RHH5264_R3636
10.4
RHH5207_R3578
8.8
RHH5299_R3665
19.5
T-reg nTPM: 26.1
Samples: 4
Max nTPM: 38.9
Min nTPM: 19.1
RHH5301_R3667
38.9
RHH5237_R3609
26.7
RHH5266_R3638
19.5
RHH5209_R3580
19.1
Terminal effector memory CD4 T-cell nTPM: 6.9
Samples: 2
Max nTPM: 9.8
Min nTPM: 4.0
RHH5243_R3615
4.0
RHH5272_R3644
9.8
Terminal effector memory CD8 T-cell nTPM: 15.9
Samples: 4
Max nTPM: 23.7
Min nTPM: 9.1
RHH5232_R3604
9.1
RHH5204_R3575
23.7
RHH5261_R3633
11.7
RHH5296_R3662
18.9
Vd2 gdTCR nTPM: 11.3
Samples: 4
Max nTPM: 18.5
Min nTPM: 2.8
RHH5234_R3606
2.8
RHH5206_R3577
18.5
RHH5263_R3635
12.1
RHH5298_R3664
11.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
