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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
494.4
nTPM
Monaco:
107.3
nTPM
Schmiedel:
82.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
494.4
HPA sample
nTPM
gdT-cell nTPM: 275.5
Samples: 6
Max nTPM: 327.5
Min nTPM: 202.2
P10809_1007
202.2
P10809_1022
264.1
P10809_1041
317.1
P10809_1060
255.0
P10809_1077
327.5
P10809_1098
287.3
MAIT T-cell nTPM: 321.6
Samples: 6
Max nTPM: 375.0
Min nTPM: 194.8
P10809_1006
194.8
P10809_1024
367.2
P10809_1043
332.5
P10809_1062
333.9
P10809_1083
325.9
P10809_1097
375.0
Memory CD4 T-cell nTPM: 469.1
Samples: 6
Max nTPM: 574.4
Min nTPM: 333.8
P10809_1014
333.8
P10809_1026
574.4
P10809_1045
426.4
P10809_1064
457.8
P10809_1086
469.3
P10809_1113
552.6
Memory CD8 T-cell nTPM: 341.8
Samples: 5
Max nTPM: 406.5
Min nTPM: 229.2
P10809_1012
229.2
P10809_1027
406.5
P10809_1046
307.6
P10809_1065
367.3
P10809_1111
398.6
Naive CD4 T-cell nTPM: 417.4
Samples: 6
Max nTPM: 509.3
Min nTPM: 327.9
P10809_1015
327.9
P10809_1030
509.3
P10809_1049
418.9
P10809_1068
398.0
P10809_1085
431.1
P10809_1112
419.0
Naive CD8 T-cell nTPM: 390.3
Samples: 6
Max nTPM: 461.0
Min nTPM: 356.0
P10809_1016
361.0
P10809_1031
461.0
P10809_1050
356.0
P10809_1069
416.1
P10809_1087
372.5
P10809_1110
375.0
T-reg nTPM: 494.4
Samples: 6
Max nTPM: 585.4
Min nTPM: 345.9
P10809_1018
345.9
P10809_1037
585.4
P10809_1056
412.8
P10809_1075
520.9
P10809_1094
542.1
P10809_1106
559.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.5
Samples: 4
Max nTPM: 116.8
Min nTPM: 37.1
RHH5202_R3573
37.1
RHH5230_R3602
80.8
RHH5259_R3631
116.8
RHH5288_R3660
79.1
Effector memory CD8 T-cell nTPM: 49.6
Samples: 4
Max nTPM: 74.9
Min nTPM: 26.6
RHH5203_R3574
50.7
RHH5231_R3603
46.0
RHH5260_R3632
74.9
RHH5289_R3661
26.6
MAIT T-cell nTPM: 50.9
Samples: 4
Max nTPM: 61.5
Min nTPM: 40.3
RHH5233_R3605
40.3
RHH5205_R3576
49.0
RHH5262_R3634
61.5
RHH5297_R3663
52.6
Memory CD4 T-cell TFH nTPM: 88.3
Samples: 4
Max nTPM: 143.7
Min nTPM: 62.9
RHH5300_R3666
71.9
RHH5236_R3608
143.7
RHH5265_R3637
74.7
RHH5208_R3579
62.9
Memory CD4 T-cell Th1 nTPM: 107.3
Samples: 4
Max nTPM: 157.6
Min nTPM: 52.0
RHH5210_R3581
52.0
RHH5302_R3668
111.7
RHH5238_R3610
157.6
RHH5267_R3639
108.0
Memory CD4 T-cell Th1/Th17 nTPM: 86.1
Samples: 4
Max nTPM: 106.0
Min nTPM: 72.2
RHH5303_R3669
77.8
RHH5211_R3582
72.2
RHH5239_R3611
88.3
RHH5268_R3640
106.0
Memory CD4 T-cell Th17 nTPM: 81.4
Samples: 4
Max nTPM: 88.6
Min nTPM: 73.3
RHH5304_R3670
88.6
RHH5212_R3583
75.5
RHH5240_R3612
88.2
RHH5269_R3641
73.3
Memory CD4 T-cell Th2 nTPM: 86.0
Samples: 4
Max nTPM: 105.9
Min nTPM: 71.4
RHH5305_R3671
105.9
RHH5213_R3584
73.3
RHH5241_R3613
93.4
RHH5270_R3642
71.4
Naive CD4 T-cell nTPM: 85.7
Samples: 4
Max nTPM: 116.2
Min nTPM: 67.1
RHH5306_R3672
67.1
RHH5214_R3585
116.2
RHH5242_R3614
75.2
RHH5271_R3643
84.1
Naive CD8 T-cell nTPM: 88.0
Samples: 4
Max nTPM: 125.1
Min nTPM: 49.2
RHH5201_R3572
49.2
RHH5229_R3601
125.1
RHH5258_R3630
70.2
RHH5287_R3659
107.6
Non-Vd2 gdTCR nTPM: 49.7
Samples: 4
Max nTPM: 62.6
Min nTPM: 35.1
RHH5235_R3607
62.6
RHH5264_R3636
46.4
RHH5207_R3578
35.1
RHH5299_R3665
54.8
T-reg nTPM: 86.1
Samples: 4
Max nTPM: 94.3
Min nTPM: 73.2
RHH5301_R3667
94.3
RHH5237_R3609
86.0
RHH5266_R3638
73.2
RHH5209_R3580
90.7
Terminal effector memory CD4 T-cell nTPM: 49.6
Samples: 2
Max nTPM: 60.6
Min nTPM: 38.6
RHH5243_R3615
60.6
RHH5272_R3644
38.6
Terminal effector memory CD8 T-cell nTPM: 79.2
Samples: 4
Max nTPM: 120.7
Min nTPM: 47.2
RHH5232_R3604
47.2
RHH5204_R3575
120.7
RHH5261_R3633
99.0
RHH5296_R3662
49.7
Vd2 gdTCR nTPM: 82.7
Samples: 4
Max nTPM: 116.6
Min nTPM: 52.1
RHH5234_R3606
52.1
RHH5206_R3577
116.6
RHH5263_R3635
74.5
RHH5298_R3664
87.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
