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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.3
nTPM
Monaco:
73.1
nTPM
Schmiedel:
69.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.3
HPA sample
nTPM
gdT-cell nTPM: 24.5
Samples: 6
Max nTPM: 35.8
Min nTPM: 10.9
P10809_1007
29.8
P10809_1022
22.8
P10809_1041
25.9
P10809_1060
10.9
P10809_1077
21.9
P10809_1098
35.8
MAIT T-cell nTPM: 26.5
Samples: 6
Max nTPM: 33.5
Min nTPM: 13.5
P10809_1006
29.5
P10809_1024
21.2
P10809_1043
33.5
P10809_1062
13.5
P10809_1083
32.8
P10809_1097
28.4
Memory CD4 T-cell nTPM: 34.8
Samples: 6
Max nTPM: 53.7
Min nTPM: 12.7
P10809_1014
41.2
P10809_1026
48.8
P10809_1045
53.7
P10809_1064
32.4
P10809_1086
20.2
P10809_1113
12.7
Memory CD8 T-cell nTPM: 37.8
Samples: 5
Max nTPM: 47.2
Min nTPM: 19.9
P10809_1012
47.2
P10809_1027
19.9
P10809_1046
47.2
P10809_1065
30.7
P10809_1111
44.2
Naive CD4 T-cell nTPM: 39.3
Samples: 6
Max nTPM: 69.3
Min nTPM: 25.5
P10809_1015
35.9
P10809_1030
44.2
P10809_1049
69.3
P10809_1068
31.6
P10809_1085
29.2
P10809_1112
25.5
Naive CD8 T-cell nTPM: 29.5
Samples: 6
Max nTPM: 36.1
Min nTPM: 11.7
P10809_1016
27.9
P10809_1031
35.3
P10809_1050
36.1
P10809_1069
35.6
P10809_1087
11.7
P10809_1110
30.2
T-reg nTPM: 34.7
Samples: 6
Max nTPM: 84.2
Min nTPM: 14.9
P10809_1018
19.3
P10809_1037
38.0
P10809_1056
84.2
P10809_1075
28.7
P10809_1094
14.9
P10809_1106
22.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 93.5
Min nTPM: 30.4
RHH5202_R3573
30.4
RHH5230_R3602
67.5
RHH5259_R3631
93.5
RHH5288_R3660
38.4
Effector memory CD8 T-cell nTPM: 60.5
Samples: 4
Max nTPM: 106.8
Min nTPM: 19.4
RHH5203_R3574
38.2
RHH5231_R3603
77.7
RHH5260_R3632
106.8
RHH5289_R3661
19.4
MAIT T-cell nTPM: 42.7
Samples: 4
Max nTPM: 83.4
Min nTPM: 14.2
RHH5233_R3605
14.2
RHH5205_R3576
43.3
RHH5262_R3634
83.4
RHH5297_R3663
29.9
Memory CD4 T-cell TFH nTPM: 57.9
Samples: 4
Max nTPM: 130.4
Min nTPM: 8.6
RHH5300_R3666
55.9
RHH5236_R3608
130.4
RHH5265_R3637
36.7
RHH5208_R3579
8.6
Memory CD4 T-cell Th1 nTPM: 52.2
Samples: 4
Max nTPM: 100.7
Min nTPM: 27.5
RHH5210_R3581
27.5
RHH5302_R3668
29.6
RHH5238_R3610
50.8
RHH5267_R3639
100.7
Memory CD4 T-cell Th1/Th17 nTPM: 61.1
Samples: 4
Max nTPM: 85.9
Min nTPM: 18.9
RHH5303_R3669
18.9
RHH5211_R3582
65.6
RHH5239_R3611
85.9
RHH5268_R3640
73.8
Memory CD4 T-cell Th17 nTPM: 63.3
Samples: 4
Max nTPM: 101.5
Min nTPM: 28.1
RHH5304_R3670
28.1
RHH5212_R3583
78.8
RHH5240_R3612
44.8
RHH5269_R3641
101.5
Memory CD4 T-cell Th2 nTPM: 70.3
Samples: 4
Max nTPM: 104.3
Min nTPM: 38.1
RHH5305_R3671
56.7
RHH5213_R3584
82.1
RHH5241_R3613
38.1
RHH5270_R3642
104.3
Naive CD4 T-cell nTPM: 56.9
Samples: 4
Max nTPM: 80.1
Min nTPM: 32.0
RHH5306_R3672
51.8
RHH5214_R3585
80.1
RHH5242_R3614
32.0
RHH5271_R3643
63.8
Naive CD8 T-cell nTPM: 50.9
Samples: 4
Max nTPM: 78.2
Min nTPM: 19.2
RHH5201_R3572
19.2
RHH5229_R3601
78.2
RHH5258_R3630
65.9
RHH5287_R3659
40.4
Non-Vd2 gdTCR nTPM: 34.7
Samples: 4
Max nTPM: 41.4
Min nTPM: 28.8
RHH5235_R3607
39.4
RHH5264_R3636
28.8
RHH5207_R3578
29.3
RHH5299_R3665
41.4
T-reg nTPM: 73.1
Samples: 4
Max nTPM: 109.5
Min nTPM: 39.1
RHH5301_R3667
39.1
RHH5237_R3609
109.5
RHH5266_R3638
68.8
RHH5209_R3580
75.1
Terminal effector memory CD4 T-cell nTPM: 44.9
Samples: 2
Max nTPM: 59.0
Min nTPM: 30.8
RHH5243_R3615
59.0
RHH5272_R3644
30.8
Terminal effector memory CD8 T-cell nTPM: 46.2
Samples: 4
Max nTPM: 103.3
Min nTPM: 21.8
RHH5232_R3604
30.4
RHH5204_R3575
21.8
RHH5261_R3633
103.3
RHH5296_R3662
29.3
Vd2 gdTCR nTPM: 44.2
Samples: 4
Max nTPM: 51.0
Min nTPM: 40.9
RHH5234_R3606
51.0
RHH5206_R3577
41.0
RHH5263_R3635
40.9
RHH5298_R3664
44.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
