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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
158.0
nTPM
Monaco:
243.2
nTPM
Schmiedel:
466.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.0
HPA sample
nTPM
gdT-cell nTPM: 118.2
Samples: 6
Max nTPM: 163.8
Min nTPM: 84.9
P10809_1007
84.9
P10809_1022
142.4
P10809_1041
163.8
P10809_1060
105.3
P10809_1077
93.4
P10809_1098
119.4
MAIT T-cell nTPM: 158.0
Samples: 6
Max nTPM: 202.5
Min nTPM: 98.2
P10809_1006
98.2
P10809_1024
182.1
P10809_1043
202.5
P10809_1062
172.4
P10809_1083
125.1
P10809_1097
167.9
Memory CD4 T-cell nTPM: 107.6
Samples: 6
Max nTPM: 131.1
Min nTPM: 88.3
P10809_1014
88.3
P10809_1026
131.1
P10809_1045
125.6
P10809_1064
98.2
P10809_1086
89.4
P10809_1113
113.0
Memory CD8 T-cell nTPM: 122.1
Samples: 5
Max nTPM: 153.3
Min nTPM: 100.8
P10809_1012
100.8
P10809_1027
131.4
P10809_1046
153.3
P10809_1065
118.7
P10809_1111
106.1
Naive CD4 T-cell nTPM: 90.4
Samples: 6
Max nTPM: 122.2
Min nTPM: 68.8
P10809_1015
68.8
P10809_1030
90.1
P10809_1049
122.2
P10809_1068
89.4
P10809_1085
78.2
P10809_1112
93.9
Naive CD8 T-cell nTPM: 97.5
Samples: 6
Max nTPM: 132.5
Min nTPM: 71.9
P10809_1016
71.9
P10809_1031
132.5
P10809_1050
107.9
P10809_1069
106.2
P10809_1087
79.9
P10809_1110
86.4
T-reg nTPM: 112.9
Samples: 6
Max nTPM: 136.3
Min nTPM: 80.5
P10809_1018
80.5
P10809_1037
131.4
P10809_1056
136.3
P10809_1075
115.3
P10809_1094
115.1
P10809_1106
98.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 171.0
Samples: 4
Max nTPM: 230.9
Min nTPM: 113.4
RHH5202_R3573
206.3
RHH5230_R3602
230.9
RHH5259_R3631
113.4
RHH5288_R3660
133.2
Effector memory CD8 T-cell nTPM: 195.8
Samples: 4
Max nTPM: 225.8
Min nTPM: 168.5
RHH5203_R3574
225.8
RHH5231_R3603
168.5
RHH5260_R3632
185.7
RHH5289_R3661
203.3
MAIT T-cell nTPM: 243.2
Samples: 4
Max nTPM: 281.0
Min nTPM: 198.1
RHH5233_R3605
231.2
RHH5205_R3576
281.0
RHH5262_R3634
262.5
RHH5297_R3663
198.1
Memory CD4 T-cell TFH nTPM: 190.2
Samples: 4
Max nTPM: 279.0
Min nTPM: 139.3
RHH5300_R3666
139.3
RHH5236_R3608
279.0
RHH5265_R3637
141.7
RHH5208_R3579
200.8
Memory CD4 T-cell Th1 nTPM: 142.9
Samples: 4
Max nTPM: 156.0
Min nTPM: 127.0
RHH5210_R3581
156.0
RHH5302_R3668
135.4
RHH5238_R3610
127.0
RHH5267_R3639
153.3
Memory CD4 T-cell Th1/Th17 nTPM: 165.9
Samples: 4
Max nTPM: 224.4
Min nTPM: 108.5
RHH5303_R3669
182.2
RHH5211_R3582
224.4
RHH5239_R3611
108.5
RHH5268_R3640
148.6
Memory CD4 T-cell Th17 nTPM: 170.4
Samples: 4
Max nTPM: 203.5
Min nTPM: 122.9
RHH5304_R3670
169.8
RHH5212_R3583
203.5
RHH5240_R3612
185.5
RHH5269_R3641
122.9
Memory CD4 T-cell Th2 nTPM: 174.2
Samples: 4
Max nTPM: 214.9
Min nTPM: 150.8
RHH5305_R3671
160.9
RHH5213_R3584
214.9
RHH5241_R3613
150.8
RHH5270_R3642
170.1
Naive CD4 T-cell nTPM: 133.0
Samples: 4
Max nTPM: 167.6
Min nTPM: 99.5
RHH5306_R3672
99.5
RHH5214_R3585
167.6
RHH5242_R3614
111.5
RHH5271_R3643
153.2
Naive CD8 T-cell nTPM: 142.8
Samples: 4
Max nTPM: 184.2
Min nTPM: 97.6
RHH5201_R3572
184.2
RHH5229_R3601
97.6
RHH5258_R3630
156.3
RHH5287_R3659
133.0
Non-Vd2 gdTCR nTPM: 195.3
Samples: 4
Max nTPM: 233.7
Min nTPM: 127.8
RHH5235_R3607
225.8
RHH5264_R3636
193.9
RHH5207_R3578
233.7
RHH5299_R3665
127.8
T-reg nTPM: 182.6
Samples: 4
Max nTPM: 214.2
Min nTPM: 158.7
RHH5301_R3667
158.7
RHH5237_R3609
184.9
RHH5266_R3638
172.4
RHH5209_R3580
214.2
Terminal effector memory CD4 T-cell nTPM: 121.3
Samples: 2
Max nTPM: 121.4
Min nTPM: 121.2
RHH5243_R3615
121.4
RHH5272_R3644
121.2
Terminal effector memory CD8 T-cell nTPM: 183.0
Samples: 4
Max nTPM: 212.7
Min nTPM: 163.2
RHH5232_R3604
212.7
RHH5204_R3575
163.2
RHH5261_R3633
177.5
RHH5296_R3662
178.6
Vd2 gdTCR nTPM: 203.2
Samples: 4
Max nTPM: 237.3
Min nTPM: 159.8
RHH5234_R3606
237.3
RHH5206_R3577
201.8
RHH5263_R3635
213.8
RHH5298_R3664
159.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
