HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:857.4 nTPM
HPA Brain:247.1 nTPM
GTEx:857.4 nTPM
FANTOM5:98.4 Scaled Tags Per Million
Mouse:282.9 nTPM
Allen mouse:24.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009561
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 247.1
Sample id Sample description nTPM
Hippocampus
nTPM: 222.3
1898 Male, age 80, left hemisphere 265.2
2529 Female, age 94, left hemisphere 242.8
2621 Female, age 67, right hemisphere 228.1
2148 Female, age 91, left hemisphere 209.7
1911 Female, age 85, right hemisphere 206.8
1855 Male, age 76, left hemisphere 181.4
Dentate gyrus
nTPM: 223.3
2530 Female, age 94, left hemisphere 289.5
2531 Female, age 67, both hemispheres 246.0
2010 Male, age 76, both hemispheres 221.7
2528 Male, age 74, both hemispheres 206.5
1927 Female, age 91, both hemispheres 196.0
2246 Female, age 85, both hemispheres 179.9
Entorhinal gyrus
nTPM: 247.1
2686 Male, age 75, right hemisphere 314.0
2117 Female, age 91, right hemisphere 247.6
2764 Male, age 80, right hemisphere 240.8
2613 Female, age 94, left hemisphere 235.1
1938 Female, age 85, left hemisphere 227.2
1787 Male, age 76, left hemisphere 218.2
Hippocampus, CA1
nTPM: 207.4
2749 Male, age 80, left hemisphere 228.2
2082 Female, age 91, right hemisphere 219.8
2527 Male, age 74, both hemispheres 201.0
2045 Male, age 76, both hemispheres 199.2
1873 Female, age 85, both hemispheres 189.0
Hippocampus, CA2
nTPM: 214.4
1963 Male, age 80, left hemisphere 293.1
2437 Female, age 94, left hemisphere 214.9
2113 Female, age 91, right hemisphere 210.4
1940 Female, age 85, left hemisphere 191.9
1892 Male, age 76, both hemispheres 189.7
2249 Male, age 74, both hemispheres 186.0
Hippocampus, CA3
nTPM: 214.1
2861 Female, age 67, both hemispheres 263.5
1867 Male, age 76, both hemispheres 224.6
2137 Male, age 80, left hemisphere 220.7
1891 Female, age 85, both hemispheres 217.3
2620 Female, age 94, left hemisphere 195.0
2436 Male, age 74, both hemispheres 163.5
Parahippocampal cortex
nTPM: 205.9
2018 Male, age 76, both hemispheres 231.8
1933 Female, age 85, both hemispheres 216.0
1850 Male, age 80, both hemispheres 212.9
1990 Female, age 91, right hemisphere 210.8
2532 Female, age 72, left hemisphere 207.7
2245 Female, age 91, both hemispheres 206.0
2692 Male, age 74, both hemispheres 205.8
2622 Female, age 67, right hemisphere 198.9
2250 Female, age 67, right hemisphere 191.4
2693 Female, age 94, both hemispheres 177.7
Perirhinal gyrus
nTPM: 214.7
1847 Female, age 91, left hemisphere 229.9
2848 Male, age 76, right hemisphere 226.0
1841 Female, age 85, right hemisphere 225.4
1794 Male, age 80, right hemisphere 207.4
2521 Female, age 94, right hemisphere 184.7
Subiculum
nTPM: 213.4
1977 Female, age 85, both hemispheres 241.0
2042 Male, age 76, both hemispheres 239.8
2729 Female, age 91, right hemisphere 222.2
1901 Male, age 80, both hemispheres 210.1
2619 Male, age 74, both hemispheres 195.3
2438 Female, age 94, left hemisphere 172.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 857.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 857.4
Samples: 197

Max nTPM: 2043.0
Min nTPM: 405.1
Std nTPM: 287.6
Median nTPM: 799.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2043.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1995.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1830.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1763.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1667.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1653.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1568.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1555.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1454.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1401.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1369.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.4
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 55.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 282.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 280.4
Samples: 4

Max nTPM: 294.8
Min nTPM: 261.7
Sample A Male 281.3
Sample B Male 261.7
Sample C Female 294.8
Sample D Female 283.7
Hippocampal formation
nTPM: 282.9
Samples: 4

Max nTPM: 296.0
Min nTPM: 261.9
Sample A Male 290.1
Sample B Male 261.9
Sample C Female 283.4
Sample D Female 296.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.6
77620255 Antisense, RP_070129_04_C07, Mouse strain C57BL/6J (56 days, male) 24.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org