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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
226.5
nTPM
Monaco:
189.4
nTPM
Schmiedel:
104.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.5
HPA sample
nTPM
gdT-cell nTPM: 179.3
Samples: 6
Max nTPM: 222.3
Min nTPM: 108.4
P10809_1007
108.4
P10809_1022
212.7
P10809_1041
222.3
P10809_1060
176.6
P10809_1077
178.5
P10809_1098
177.0
MAIT T-cell nTPM: 181.1
Samples: 6
Max nTPM: 221.4
Min nTPM: 97.8
P10809_1006
97.8
P10809_1024
205.6
P10809_1043
180.4
P10809_1062
182.8
P10809_1083
198.3
P10809_1097
221.4
Memory CD4 T-cell nTPM: 177.4
Samples: 6
Max nTPM: 198.9
Min nTPM: 116.1
P10809_1014
116.1
P10809_1026
198.9
P10809_1045
177.2
P10809_1064
184.9
P10809_1086
198.7
P10809_1113
188.3
Memory CD8 T-cell nTPM: 170.9
Samples: 5
Max nTPM: 198.4
Min nTPM: 121.6
P10809_1012
121.6
P10809_1027
198.4
P10809_1046
184.0
P10809_1065
180.8
P10809_1111
169.9
Naive CD4 T-cell nTPM: 137.9
Samples: 6
Max nTPM: 182.9
Min nTPM: 66.7
P10809_1015
66.7
P10809_1030
150.0
P10809_1049
182.9
P10809_1068
130.3
P10809_1085
156.5
P10809_1112
140.8
Naive CD8 T-cell nTPM: 154.1
Samples: 6
Max nTPM: 200.8
Min nTPM: 72.3
P10809_1016
72.3
P10809_1031
174.5
P10809_1050
157.3
P10809_1069
200.8
P10809_1087
179.1
P10809_1110
140.4
T-reg nTPM: 226.5
Samples: 6
Max nTPM: 261.6
Min nTPM: 121.5
P10809_1018
121.5
P10809_1037
259.1
P10809_1056
230.4
P10809_1075
230.5
P10809_1094
255.8
P10809_1106
261.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.5
Samples: 4
Max nTPM: 215.7
Min nTPM: 73.4
RHH5202_R3573
180.1
RHH5230_R3602
116.8
RHH5259_R3631
73.4
RHH5288_R3660
215.7
Effector memory CD8 T-cell nTPM: 157.3
Samples: 4
Max nTPM: 187.3
Min nTPM: 132.4
RHH5203_R3574
149.1
RHH5231_R3603
187.3
RHH5260_R3632
132.4
RHH5289_R3661
160.2
MAIT T-cell nTPM: 184.9
Samples: 4
Max nTPM: 232.1
Min nTPM: 100.1
RHH5233_R3605
226.4
RHH5205_R3576
100.1
RHH5262_R3634
181.1
RHH5297_R3663
232.1
Memory CD4 T-cell TFH nTPM: 189.5
Samples: 4
Max nTPM: 318.1
Min nTPM: 130.1
RHH5300_R3666
168.0
RHH5236_R3608
318.1
RHH5265_R3637
141.6
RHH5208_R3579
130.1
Memory CD4 T-cell Th1 nTPM: 141.1
Samples: 4
Max nTPM: 189.9
Min nTPM: 114.3
RHH5210_R3581
139.1
RHH5302_R3668
189.9
RHH5238_R3610
114.3
RHH5267_R3639
121.2
Memory CD4 T-cell Th1/Th17 nTPM: 163.8
Samples: 4
Max nTPM: 254.5
Min nTPM: 49.3
RHH5303_R3669
241.8
RHH5211_R3582
254.5
RHH5239_R3611
49.3
RHH5268_R3640
109.6
Memory CD4 T-cell Th17 nTPM: 117.2
Samples: 4
Max nTPM: 152.9
Min nTPM: 90.4
RHH5304_R3670
127.4
RHH5212_R3583
152.9
RHH5240_R3612
98.1
RHH5269_R3641
90.4
Memory CD4 T-cell Th2 nTPM: 167.5
Samples: 4
Max nTPM: 196.2
Min nTPM: 116.9
RHH5305_R3671
191.2
RHH5213_R3584
165.6
RHH5241_R3613
196.2
RHH5270_R3642
116.9
Naive CD4 T-cell nTPM: 130.1
Samples: 4
Max nTPM: 191.7
Min nTPM: 86.1
RHH5306_R3672
141.9
RHH5214_R3585
191.7
RHH5242_R3614
100.5
RHH5271_R3643
86.1
Naive CD8 T-cell nTPM: 116.9
Samples: 4
Max nTPM: 150.5
Min nTPM: 62.7
RHH5201_R3572
140.3
RHH5229_R3601
62.7
RHH5258_R3630
150.5
RHH5287_R3659
113.9
Non-Vd2 gdTCR nTPM: 174.2
Samples: 4
Max nTPM: 217.2
Min nTPM: 95.8
RHH5235_R3607
95.8
RHH5264_R3636
217.2
RHH5207_R3578
170.4
RHH5299_R3665
213.3
T-reg nTPM: 174.5
Samples: 4
Max nTPM: 259.8
Min nTPM: 108.7
RHH5301_R3667
200.2
RHH5237_R3609
259.8
RHH5266_R3638
108.7
RHH5209_R3580
129.2
Terminal effector memory CD4 T-cell nTPM: 155.2
Samples: 2
Max nTPM: 203.1
Min nTPM: 107.2
RHH5243_R3615
107.2
RHH5272_R3644
203.1
Terminal effector memory CD8 T-cell nTPM: 189.1
Samples: 4
Max nTPM: 234.6
Min nTPM: 138.0
RHH5232_R3604
183.0
RHH5204_R3575
234.6
RHH5261_R3633
138.0
RHH5296_R3662
200.8
Vd2 gdTCR nTPM: 160.8
Samples: 4
Max nTPM: 198.3
Min nTPM: 134.6
RHH5234_R3606
137.7
RHH5206_R3577
198.3
RHH5263_R3635
134.6
RHH5298_R3664
172.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
