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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.1
nTPM
Monaco:
88.3
nTPM
Schmiedel:
70.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
HPA sample
nTPM
gdT-cell nTPM: 50.8
Samples: 6
Max nTPM: 65.5
Min nTPM: 35.6
P10809_1007
35.6
P10809_1022
57.6
P10809_1041
65.5
P10809_1060
42.6
P10809_1077
52.1
P10809_1098
51.3
MAIT T-cell nTPM: 60.2
Samples: 6
Max nTPM: 81.0
Min nTPM: 38.6
P10809_1006
38.6
P10809_1024
81.0
P10809_1043
74.4
P10809_1062
49.9
P10809_1083
65.6
P10809_1097
51.5
Memory CD4 T-cell nTPM: 61.3
Samples: 6
Max nTPM: 72.1
Min nTPM: 48.7
P10809_1014
48.7
P10809_1026
66.2
P10809_1045
61.3
P10809_1064
61.4
P10809_1086
57.9
P10809_1113
72.1
Memory CD8 T-cell nTPM: 60.4
Samples: 5
Max nTPM: 77.5
Min nTPM: 35.8
P10809_1012
49.3
P10809_1027
72.8
P10809_1046
66.5
P10809_1065
35.8
P10809_1111
77.5
Naive CD4 T-cell nTPM: 71.5
Samples: 6
Max nTPM: 93.0
Min nTPM: 40.7
P10809_1015
40.7
P10809_1030
66.8
P10809_1049
93.0
P10809_1068
70.7
P10809_1085
71.5
P10809_1112
86.0
Naive CD8 T-cell nTPM: 61.0
Samples: 6
Max nTPM: 82.2
Min nTPM: 47.4
P10809_1016
47.7
P10809_1031
82.2
P10809_1050
60.3
P10809_1069
50.6
P10809_1087
47.4
P10809_1110
78.0
T-reg nTPM: 75.1
Samples: 6
Max nTPM: 92.4
Min nTPM: 59.4
P10809_1018
59.4
P10809_1037
78.9
P10809_1056
92.4
P10809_1075
60.9
P10809_1094
76.6
P10809_1106
82.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.3
Samples: 4
Max nTPM: 74.7
Min nTPM: 43.9
RHH5202_R3573
63.5
RHH5230_R3602
74.7
RHH5259_R3631
43.9
RHH5288_R3660
62.9
Effector memory CD8 T-cell nTPM: 60.7
Samples: 4
Max nTPM: 71.3
Min nTPM: 45.1
RHH5203_R3574
71.3
RHH5231_R3603
66.7
RHH5260_R3632
45.1
RHH5289_R3661
59.5
MAIT T-cell nTPM: 79.4
Samples: 4
Max nTPM: 99.5
Min nTPM: 49.9
RHH5233_R3605
80.2
RHH5205_R3576
49.9
RHH5262_R3634
99.5
RHH5297_R3663
88.1
Memory CD4 T-cell TFH nTPM: 87.5
Samples: 4
Max nTPM: 113.1
Min nTPM: 68.2
RHH5300_R3666
98.2
RHH5236_R3608
113.1
RHH5265_R3637
70.5
RHH5208_R3579
68.2
Memory CD4 T-cell Th1 nTPM: 69.4
Samples: 4
Max nTPM: 86.0
Min nTPM: 51.9
RHH5210_R3581
86.0
RHH5302_R3668
81.7
RHH5238_R3610
51.9
RHH5267_R3639
58.0
Memory CD4 T-cell Th1/Th17 nTPM: 75.1
Samples: 4
Max nTPM: 116.4
Min nTPM: 33.6
RHH5303_R3669
89.5
RHH5211_R3582
116.4
RHH5239_R3611
33.6
RHH5268_R3640
60.8
Memory CD4 T-cell Th17 nTPM: 60.6
Samples: 4
Max nTPM: 89.3
Min nTPM: 41.2
RHH5304_R3670
69.1
RHH5212_R3583
89.3
RHH5240_R3612
42.8
RHH5269_R3641
41.2
Memory CD4 T-cell Th2 nTPM: 75.2
Samples: 4
Max nTPM: 88.3
Min nTPM: 58.3
RHH5305_R3671
88.3
RHH5213_R3584
85.7
RHH5241_R3613
58.3
RHH5270_R3642
68.4
Naive CD4 T-cell nTPM: 88.3
Samples: 4
Max nTPM: 98.9
Min nTPM: 69.4
RHH5306_R3672
98.9
RHH5214_R3585
96.6
RHH5242_R3614
88.2
RHH5271_R3643
69.4
Naive CD8 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 91.7
Min nTPM: 34.8
RHH5201_R3572
74.7
RHH5229_R3601
34.8
RHH5258_R3630
91.4
RHH5287_R3659
91.7
Non-Vd2 gdTCR nTPM: 61.0
Samples: 4
Max nTPM: 79.2
Min nTPM: 39.9
RHH5235_R3607
39.9
RHH5264_R3636
74.3
RHH5207_R3578
50.7
RHH5299_R3665
79.2
T-reg nTPM: 80.2
Samples: 4
Max nTPM: 104.9
Min nTPM: 54.3
RHH5301_R3667
91.4
RHH5237_R3609
104.9
RHH5266_R3638
54.3
RHH5209_R3580
70.0
Terminal effector memory CD4 T-cell nTPM: 63.8
Samples: 2
Max nTPM: 80.1
Min nTPM: 47.4
RHH5243_R3615
47.4
RHH5272_R3644
80.1
Terminal effector memory CD8 T-cell nTPM: 70.9
Samples: 4
Max nTPM: 80.4
Min nTPM: 58.9
RHH5232_R3604
80.4
RHH5204_R3575
76.2
RHH5261_R3633
58.9
RHH5296_R3662
67.9
Vd2 gdTCR nTPM: 78.9
Samples: 4
Max nTPM: 93.7
Min nTPM: 60.2
RHH5234_R3606
88.2
RHH5206_R3577
73.4
RHH5263_R3635
60.2
RHH5298_R3664
93.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
