HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.1 nTPM
HPA Brain:25.1 nTPM
GTEx:16.1 nTPM
FANTOM5:131.6 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:20.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034506
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 23.2
1898 Male, age 80, left hemisphere 26.6
1855 Male, age 76, left hemisphere 24.7
1911 Female, age 85, right hemisphere 24.3
2529 Female, age 94, left hemisphere 23.8
2621 Female, age 67, right hemisphere 21.4
2148 Female, age 91, left hemisphere 18.8
Dentate gyrus
nTPM: 23.1
2010 Male, age 76, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.3
2528 Male, age 74, both hemispheres 23.4
1927 Female, age 91, both hemispheres 23.3
2530 Female, age 94, left hemisphere 22.0
2531 Female, age 67, both hemispheres 18.1
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 26.5
1787 Male, age 76, left hemisphere 22.9
2117 Female, age 91, right hemisphere 21.0
2686 Male, age 75, right hemisphere 18.6
2764 Male, age 80, right hemisphere 18.5
2613 Female, age 94, left hemisphere 17.6
Hippocampus, CA1
nTPM: 24.0
2749 Male, age 80, left hemisphere 28.6
1873 Female, age 85, both hemispheres 27.8
2527 Male, age 74, both hemispheres 24.8
2045 Male, age 76, both hemispheres 20.3
2082 Female, age 91, right hemisphere 18.8
Hippocampus, CA2
nTPM: 21.8
1940 Female, age 85, left hemisphere 24.9
2249 Male, age 74, both hemispheres 24.7
1892 Male, age 76, both hemispheres 21.3
1963 Male, age 80, left hemisphere 20.5
2437 Female, age 94, left hemisphere 19.9
2113 Female, age 91, right hemisphere 19.5
Hippocampus, CA3
nTPM: 22.5
2436 Male, age 74, both hemispheres 26.3
2137 Male, age 80, left hemisphere 25.2
1891 Female, age 85, both hemispheres 24.5
1867 Male, age 76, both hemispheres 24.0
2861 Female, age 67, both hemispheres 18.2
2620 Female, age 94, left hemisphere 16.8
Parahippocampal cortex
nTPM: 23.7
1850 Male, age 80, both hemispheres 27.6
2250 Female, age 67, right hemisphere 26.9
1933 Female, age 85, both hemispheres 26.8
2693 Female, age 94, both hemispheres 25.2
2245 Female, age 91, both hemispheres 23.5
2532 Female, age 72, left hemisphere 23.0
2018 Male, age 76, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.6
2692 Male, age 74, both hemispheres 20.6
2622 Female, age 67, right hemisphere 19.1
Perirhinal gyrus
nTPM: 25.1
1841 Female, age 85, right hemisphere 28.9
1794 Male, age 80, right hemisphere 25.8
2521 Female, age 94, right hemisphere 24.8
1847 Female, age 91, left hemisphere 24.5
2848 Male, age 76, right hemisphere 21.7
Subiculum
nTPM: 23.6
2042 Male, age 76, both hemispheres 26.1
2438 Female, age 94, left hemisphere 25.9
1977 Female, age 85, both hemispheres 23.9
1901 Male, age 80, both hemispheres 23.6
2729 Female, age 91, right hemisphere 21.2
2619 Male, age 74, both hemispheres 20.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.1
Samples: 197

Max nTPM: 37.3
Min nTPM: 10.9
Std nTPM: 3.7
Median nTPM: 14.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 31.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 30.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 24.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 24.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 24.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 23.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.6
FF:10153-102I9 76 years, female 139.7
FF:10169-103B7 60 years, female 123.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 17.1
Sample A Female 19.4
Sample B Female 17.1
Sample C Male 18.0
Sample D Male 18.2
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.7
Sample A Female 17.8
Sample B Female 14.7
Sample C Male 17.5
Sample D Male 15.1
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.6
Sample A Female 20.0
Sample B Female 18.0
Sample C Male 18.7
Sample D Male 16.6
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.6
Sample A Female 17.1
Sample B Female 14.8
Sample C Male 17.2
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.0
Sample A Male 16.0
Sample B Male 18.0
Sample C Female 19.8
Sample D Female 21.8
Hippocampal formation
nTPM: 20.7
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.5
Sample A Male 18.5
Sample B Male 23.3
Sample C Female 21.8
Sample D Female 19.2

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