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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.6
nTPM
Monaco:
123.7
nTPM
Schmiedel:
145.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.6
HPA sample
nTPM
gdT-cell nTPM: 32.6
Samples: 6
Max nTPM: 61.5
Min nTPM: 19.2
P10809_1007
19.2
P10809_1022
23.5
P10809_1041
48.7
P10809_1060
20.1
P10809_1077
22.7
P10809_1098
61.5
MAIT T-cell nTPM: 83.7
Samples: 6
Max nTPM: 122.8
Min nTPM: 32.0
P10809_1006
71.0
P10809_1024
101.0
P10809_1043
115.5
P10809_1062
32.0
P10809_1083
59.8
P10809_1097
122.8
Memory CD4 T-cell nTPM: 71.6
Samples: 6
Max nTPM: 122.6
Min nTPM: 35.9
P10809_1014
57.1
P10809_1026
76.1
P10809_1045
80.1
P10809_1064
35.9
P10809_1086
57.6
P10809_1113
122.6
Memory CD8 T-cell nTPM: 40.1
Samples: 5
Max nTPM: 71.2
Min nTPM: 24.9
P10809_1012
36.1
P10809_1027
30.7
P10809_1046
37.4
P10809_1065
24.9
P10809_1111
71.2
Naive CD4 T-cell nTPM: 29.8
Samples: 6
Max nTPM: 41.5
Min nTPM: 18.4
P10809_1015
19.2
P10809_1030
33.6
P10809_1049
37.9
P10809_1068
18.4
P10809_1085
28.4
P10809_1112
41.5
Naive CD8 T-cell nTPM: 24.9
Samples: 6
Max nTPM: 34.2
Min nTPM: 10.3
P10809_1016
10.3
P10809_1031
27.9
P10809_1050
29.5
P10809_1069
20.1
P10809_1087
27.6
P10809_1110
34.2
T-reg nTPM: 115.6
Samples: 6
Max nTPM: 177.9
Min nTPM: 56.4
P10809_1018
73.8
P10809_1037
99.2
P10809_1056
177.9
P10809_1075
56.4
P10809_1094
118.9
P10809_1106
167.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.4
Samples: 4
Max nTPM: 103.7
Min nTPM: 77.6
RHH5202_R3573
96.8
RHH5230_R3602
77.6
RHH5259_R3631
103.4
RHH5288_R3660
103.7
Effector memory CD8 T-cell nTPM: 62.9
Samples: 4
Max nTPM: 91.3
Min nTPM: 37.3
RHH5203_R3574
64.0
RHH5231_R3603
37.3
RHH5260_R3632
91.3
RHH5289_R3661
58.8
MAIT T-cell nTPM: 96.5
Samples: 4
Max nTPM: 148.5
Min nTPM: 65.0
RHH5233_R3605
65.0
RHH5205_R3576
71.5
RHH5262_R3634
148.5
RHH5297_R3663
100.8
Memory CD4 T-cell TFH nTPM: 123.7
Samples: 4
Max nTPM: 161.6
Min nTPM: 95.7
RHH5300_R3666
123.0
RHH5236_R3608
95.7
RHH5265_R3637
161.6
RHH5208_R3579
114.5
Memory CD4 T-cell Th1 nTPM: 84.3
Samples: 4
Max nTPM: 113.7
Min nTPM: 66.1
RHH5210_R3581
75.6
RHH5302_R3668
81.8
RHH5238_R3610
66.1
RHH5267_R3639
113.7
Memory CD4 T-cell Th1/Th17 nTPM: 105.3
Samples: 4
Max nTPM: 144.0
Min nTPM: 69.1
RHH5303_R3669
99.6
RHH5211_R3582
108.4
RHH5239_R3611
69.1
RHH5268_R3640
144.0
Memory CD4 T-cell Th17 nTPM: 114.4
Samples: 4
Max nTPM: 162.4
Min nTPM: 57.7
RHH5304_R3670
95.8
RHH5212_R3583
141.5
RHH5240_R3612
57.7
RHH5269_R3641
162.4
Memory CD4 T-cell Th2 nTPM: 101.1
Samples: 4
Max nTPM: 138.0
Min nTPM: 64.2
RHH5305_R3671
105.7
RHH5213_R3584
96.5
RHH5241_R3613
64.2
RHH5270_R3642
138.0
Naive CD4 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 96.8
Min nTPM: 36.6
RHH5306_R3672
61.7
RHH5214_R3585
65.7
RHH5242_R3614
36.6
RHH5271_R3643
96.8
Naive CD8 T-cell nTPM: 47.4
Samples: 4
Max nTPM: 63.3
Min nTPM: 34.4
RHH5201_R3572
46.6
RHH5229_R3601
34.4
RHH5258_R3630
63.3
RHH5287_R3659
45.2
Non-Vd2 gdTCR nTPM: 47.0
Samples: 4
Max nTPM: 72.0
Min nTPM: 32.9
RHH5235_R3607
44.6
RHH5264_R3636
72.0
RHH5207_R3578
32.9
RHH5299_R3665
38.4
T-reg nTPM: 117.3
Samples: 4
Max nTPM: 137.2
Min nTPM: 87.7
RHH5301_R3667
132.6
RHH5237_R3609
87.7
RHH5266_R3638
137.2
RHH5209_R3580
111.7
Terminal effector memory CD4 T-cell nTPM: 48.4
Samples: 2
Max nTPM: 68.9
Min nTPM: 27.9
RHH5243_R3615
27.9
RHH5272_R3644
68.9
Terminal effector memory CD8 T-cell nTPM: 43.7
Samples: 4
Max nTPM: 65.0
Min nTPM: 24.8
RHH5232_R3604
24.8
RHH5204_R3575
49.2
RHH5261_R3633
65.0
RHH5296_R3662
35.9
Vd2 gdTCR nTPM: 85.9
Samples: 4
Max nTPM: 120.7
Min nTPM: 69.7
RHH5234_R3606
69.7
RHH5206_R3577
74.3
RHH5263_R3635
120.7
RHH5298_R3664
78.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
