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                                  • DNAJC7
                                  TISSUE PRIMARY DATA KIDNEY Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
                                  ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Dictionary
                                  Kidney
                                  Tissue proteome
                                  Kidney
                                  KIDNEY - Expression summary
                                  Protein expression
                                  Kidneyi

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  h
                                  m
                                  l
                                  n
                                  Cells in glomeruli: Low
                                  Cells in tubules: Medium
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:63.5 nTPM
                                  HPA:57.5 nTPM
                                  GTEx:63.5 nTPM
                                  FANTOM5:95.2 Scaled Tags Per Million

                                  KIDNEY - Antibody stainingi

                                  Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

                                  Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                  Antibody HPA023015Antibody HPA052395
                                  Cells in glomeruli LowNot detected
                                  Cells in tubules MediumMedium





                                  KIDNEY - HPA RNA-seqi

                                  The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                  Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
                                  Average nTPM 57.5
                                  overview
                                  Female, age 58
                                  Kidney sample 55
                                  nTPM: 45.8
                                  Cell types%
                                  Cells in tubules:
                                  60

                                  Cells in glomeruli:
                                  20

                                  Fibroblasts:
                                  5

                                  Other cell types:
                                  15

                                  overview
                                  Female, age 67
                                  Kidney sample 56
                                  nTPM: 48.7
                                  Cell types%
                                  Cells in tubules:
                                  70

                                  Cells in glomeruli:
                                  15

                                  Fibroblasts:
                                  10

                                  Other cell types:
                                  5

                                  overview
                                  Female, age 55
                                  Kidney sample 57
                                  nTPM: 35.4
                                  Cell types%
                                  Cells in tubules:
                                  80

                                  Cells in glomeruli:
                                  10

                                  Fibroblasts:
                                  5

                                  Other cell types:
                                  5

                                  overview
                                  Male, age 46
                                  Kidney sample 58
                                  nTPM: 54.6
                                  Cell types%
                                  Cells in tubules:
                                  60

                                  Cells in glomeruli:
                                  25

                                  Fibroblasts:
                                  5

                                  Other cell types:
                                  10

                                  overview
                                  Female, age 57
                                  Kidney sample 358
                                  nTPM: 64.1
                                  Cell types%
                                  Cells in tubules:
                                  60

                                  Cells in glomeruli:
                                  10

                                  Fibroblasts:
                                  10

                                  Other cell types:
                                  20

                                  overview
                                  Male, age 78
                                  Kidney sample 377
                                  nTPM: 55.7
                                  Cell types%
                                  Cells in tubules:
                                  65

                                  Cells in glomeruli:
                                  10

                                  Fibroblasts:
                                  5

                                  Other cell types:
                                  20

                                  overview
                                  Male, age 73
                                  Kidney sample 380
                                  nTPM: 93
                                  Cell types%
                                  Cells in tubules:
                                  60

                                  Cells in glomeruli:
                                  10

                                  Fibroblasts:
                                  10

                                  Other cell types:
                                  20

                                  overview
                                  Female, age 59
                                  Kidney sample 394
                                  nTPM: 55.8
                                  Cell types%
                                  Cells in tubules:
                                  65

                                  Cells in glomeruli:
                                  10

                                  Fibroblasts:
                                  10

                                  Other cell types:
                                  15

                                  overview
                                  Female, age 48
                                  Kidney sample 414
                                  nTPM: 64.6
                                  Cell types%
                                  Cells in tubules:
                                  60

                                  Cells in glomeruli:
                                  5

                                  Fibroblasts:
                                  10

                                  Other cell types:
                                  25


                                  KIDNEY - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 63.5
                                  GTEx sample id Sample description nTPM
                                  48.757.772.233.698.00102030405060708090
                                  48.757.772.233.698.00102030405060708090
                                  Kidney - Cortex
                                  Average nTPM: 60.8
                                  Samples: 85

                                  Max nTPM: 98.0
                                  Min nTPM: 33.6
                                  Std nTPM: 14.6
                                  Median nTPM: 57.7
                                  GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 98.0
                                  GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 94.4
                                  GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 88.5
                                  GTEX-REY6-1826-SM-EAZAT 60-69 years, male 88.2
                                  GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 87.8
                                  GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 87.8
                                  GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 86.8
                                  GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 85.2
                                  GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 84.1
                                  GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 82.3
                                  GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 80.7
                                  GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 80.0
                                  GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 75.9
                                  GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 75.9
                                  GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 75.1
                                  GTEX-O5YV-1226-SM-EV795 60-69 years, female 75.0
                                  GTEX-T5JC-1526-SM-4DM68 20-29 years, male 74.2
                                  GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 74.2
                                  GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 73.8
                                  GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 73.0
                                  GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 72.8
                                  GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 72.2
                                  GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 71.6
                                  GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 68.4
                                  GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 67.4
                                  GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 66.5
                                  GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 66.2
                                  GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 66.2
                                  GTEX-15CHQ-2126-SM-6871M 60-69 years, male 65.1
                                  GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 65.1
                                  GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 63.9
                                  GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 63.9
                                  GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 63.8
                                  GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 63.3
                                  GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 62.5
                                  GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 62.4
                                  GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 62.4
                                  GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 60.9
                                  GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 59.4
                                  GTEX-QDVN-1626-SM-48TZC 50-59 years, male 58.9
                                  GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 58.4
                                  GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 58.1
                                  GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 57.7
                                  GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 57.3
                                  GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 56.5
                                  GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 55.6
                                  GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 55.4
                                  GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 55.2
                                  GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 55.0
                                  GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 54.8
                                  GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 54.8
                                  GTEX-17F96-1926-SM-7MGWY 70-79 years, male 54.4
                                  GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 54.2
                                  GTEX-12696-0926-SM-5FQTV 60-69 years, male 53.8
                                  GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 52.9
                                  GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 52.7
                                  GTEX-14C39-2126-SM-664OH 40-49 years, male 52.0
                                  GTEX-17F97-1926-SM-7IGM4 50-59 years, male 51.7
                                  GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 50.4
                                  GTEX-13112-2126-SM-5GCO4 50-59 years, male 50.0
                                  GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 49.4
                                  GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 49.0
                                  GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 48.8
                                  GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 48.7
                                  GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 48.5
                                  GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 48.3
                                  GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 48.1
                                  GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 47.7
                                  GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 47.6
                                  GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 47.5
                                  GTEX-1BAJH-1826-SM-731DA 70-79 years, male 47.5
                                  GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 47.5
                                  GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 47.1
                                  GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 47.0
                                  GTEX-XPVG-0526-SM-4B65N 50-59 years, male 46.0
                                  GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 46.0
                                  GTEX-145MN-0326-SM-5QGQI 30-39 years, male 45.9
                                  GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 44.9
                                  GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 43.7
                                  GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 42.6
                                  GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 41.0
                                  GTEX-1399S-0526-SM-5IJG8 30-39 years, female 39.1
                                  GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 37.9
                                  GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 37.4
                                  GTEX-RN64-1626-SM-48FD7 50-59 years, male 33.6
                                  Show allShow less
                                  50.760.873.750.581.901020304050607080
                                  50.760.873.750.581.901020304050607080
                                  Kidney - Medulla
                                  Average nTPM: 63.5
                                  Samples: 4

                                  Max nTPM: 81.9
                                  Min nTPM: 50.5
                                  Std nTPM: 13.4
                                  Median nTPM: 60.8
                                  GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 81.9
                                  GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 70.9
                                  GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 50.7
                                  GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 50.5

                                  KIDNEY - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 95.2
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Kidney
                                  Scaled Tags Per Million: 95.2
                                  FF:10017-101C8 60,62,63 years, female 95.2

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