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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.4
nTPM
Monaco:
96.1
nTPM
Schmiedel:
0.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.4
HPA sample
nTPM
gdT-cell nTPM: 36.7
Samples: 6
Max nTPM: 48.2
Min nTPM: 28.3
P10809_1007
30.1
P10809_1022
40.8
P10809_1041
48.2
P10809_1060
28.3
P10809_1077
30.9
P10809_1098
42.0
MAIT T-cell nTPM: 39.4
Samples: 6
Max nTPM: 45.3
Min nTPM: 27.5
P10809_1006
39.1
P10809_1024
41.9
P10809_1043
43.6
P10809_1062
39.0
P10809_1083
27.5
P10809_1097
45.3
Memory CD4 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 36.0
Min nTPM: 29.5
P10809_1014
36.0
P10809_1026
34.2
P10809_1045
30.7
P10809_1064
29.5
P10809_1086
34.9
P10809_1113
35.0
Memory CD8 T-cell nTPM: 33.1
Samples: 5
Max nTPM: 38.0
Min nTPM: 26.0
P10809_1012
36.0
P10809_1027
38.0
P10809_1046
32.1
P10809_1065
26.0
P10809_1111
33.2
Naive CD4 T-cell nTPM: 19.4
Samples: 6
Max nTPM: 24.2
Min nTPM: 15.9
P10809_1015
20.9
P10809_1030
15.9
P10809_1049
17.1
P10809_1068
20.5
P10809_1085
17.5
P10809_1112
24.2
Naive CD8 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 34.0
Min nTPM: 22.0
P10809_1016
22.0
P10809_1031
27.7
P10809_1050
25.3
P10809_1069
30.3
P10809_1087
34.0
P10809_1110
22.2
T-reg nTPM: 31.7
Samples: 6
Max nTPM: 43.2
Min nTPM: 22.3
P10809_1018
40.0
P10809_1037
27.4
P10809_1056
29.7
P10809_1075
27.3
P10809_1094
43.2
P10809_1106
22.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 69.5
Samples: 4
Max nTPM: 82.5
Min nTPM: 54.8
RHH5202_R3573
61.8
RHH5230_R3602
82.5
RHH5259_R3631
79.0
RHH5288_R3660
54.8
Effector memory CD8 T-cell nTPM: 90.0
Samples: 4
Max nTPM: 95.6
Min nTPM: 85.0
RHH5203_R3574
90.0
RHH5231_R3603
89.5
RHH5260_R3632
95.6
RHH5289_R3661
85.0
MAIT T-cell nTPM: 87.5
Samples: 4
Max nTPM: 92.4
Min nTPM: 84.4
RHH5233_R3605
92.4
RHH5205_R3576
84.4
RHH5262_R3634
87.5
RHH5297_R3663
85.8
Memory CD4 T-cell TFH nTPM: 58.0
Samples: 4
Max nTPM: 79.0
Min nTPM: 40.7
RHH5300_R3666
45.1
RHH5236_R3608
79.0
RHH5265_R3637
67.0
RHH5208_R3579
40.7
Memory CD4 T-cell Th1 nTPM: 54.8
Samples: 4
Max nTPM: 71.1
Min nTPM: 42.6
RHH5210_R3581
42.6
RHH5302_R3668
52.9
RHH5238_R3610
52.7
RHH5267_R3639
71.1
Memory CD4 T-cell Th1/Th17 nTPM: 75.7
Samples: 4
Max nTPM: 80.8
Min nTPM: 70.5
RHH5303_R3669
80.8
RHH5211_R3582
70.5
RHH5239_R3611
79.5
RHH5268_R3640
72.0
Memory CD4 T-cell Th17 nTPM: 88.8
Samples: 4
Max nTPM: 107.5
Min nTPM: 76.0
RHH5304_R3670
85.5
RHH5212_R3583
76.0
RHH5240_R3612
107.5
RHH5269_R3641
86.0
Memory CD4 T-cell Th2 nTPM: 70.4
Samples: 4
Max nTPM: 83.6
Min nTPM: 60.4
RHH5305_R3671
63.4
RHH5213_R3584
83.6
RHH5241_R3613
60.4
RHH5270_R3642
74.2
Naive CD4 T-cell nTPM: 35.7
Samples: 4
Max nTPM: 53.1
Min nTPM: 25.5
RHH5306_R3672
26.7
RHH5214_R3585
25.5
RHH5242_R3614
53.1
RHH5271_R3643
37.6
Naive CD8 T-cell nTPM: 25.3
Samples: 4
Max nTPM: 39.3
Min nTPM: 18.4
RHH5201_R3572
22.4
RHH5229_R3601
18.4
RHH5258_R3630
21.0
RHH5287_R3659
39.3
Non-Vd2 gdTCR nTPM: 86.7
Samples: 4
Max nTPM: 97.2
Min nTPM: 80.0
RHH5235_R3607
97.2
RHH5264_R3636
83.0
RHH5207_R3578
80.0
RHH5299_R3665
86.4
T-reg nTPM: 52.7
Samples: 4
Max nTPM: 66.2
Min nTPM: 40.3
RHH5301_R3667
48.5
RHH5237_R3609
55.8
RHH5266_R3638
66.2
RHH5209_R3580
40.3
Terminal effector memory CD4 T-cell nTPM: 96.1
Samples: 2
Max nTPM: 106.7
Min nTPM: 85.4
RHH5243_R3615
106.7
RHH5272_R3644
85.4
Terminal effector memory CD8 T-cell nTPM: 81.9
Samples: 4
Max nTPM: 88.1
Min nTPM: 76.2
RHH5232_R3604
82.3
RHH5204_R3575
76.2
RHH5261_R3633
88.1
RHH5296_R3662
81.0
Vd2 gdTCR nTPM: 83.2
Samples: 4
Max nTPM: 101.9
Min nTPM: 74.4
RHH5234_R3606
80.7
RHH5206_R3577
75.8
RHH5263_R3635
101.9
RHH5298_R3664
74.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
