HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:28.2 nTPM
HPA Brain:27.5 nTPM
GTEx:28.2 nTPM
FANTOM5:41.6 Scaled Tags Per Million
Pig:29.9 nTPM
Mouse:64.7 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037531Antibody HPA037532
Glial cells HighNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.6
1898 Male, age 80, left hemisphere 32.5
1911 Female, age 85, right hemisphere 25.1
2529 Female, age 94, left hemisphere 24.4
1855 Male, age 76, left hemisphere 23.9
2621 Female, age 67, right hemisphere 21.1
2148 Female, age 91, left hemisphere 20.4
Dentate gyrus
nTPM: 24.8
1927 Female, age 91, both hemispheres 28.9
2010 Male, age 76, both hemispheres 28.9
2528 Male, age 74, both hemispheres 24.8
2246 Female, age 85, both hemispheres 23.7
2530 Female, age 94, left hemisphere 22.1
2531 Female, age 67, both hemispheres 20.4
Entorhinal gyrus
nTPM: 21.5
1938 Female, age 85, left hemisphere 27.2
1787 Male, age 76, left hemisphere 23.4
2117 Female, age 91, right hemisphere 22.5
2764 Male, age 80, right hemisphere 22.3
2686 Male, age 75, right hemisphere 17.2
2613 Female, age 94, left hemisphere 16.3
Hippocampus, CA1
nTPM: 27.5
2749 Male, age 80, left hemisphere 33.5
1873 Female, age 85, both hemispheres 29.5
2045 Male, age 76, both hemispheres 26.7
2527 Male, age 74, both hemispheres 24.4
2082 Female, age 91, right hemisphere 23.1
Hippocampus, CA2
nTPM: 27.1
1892 Male, age 76, both hemispheres 33.9
1963 Male, age 80, left hemisphere 31.0
2249 Male, age 74, both hemispheres 29.8
1940 Female, age 85, left hemisphere 25.1
2437 Female, age 94, left hemisphere 21.6
2113 Female, age 91, right hemisphere 21.2
Hippocampus, CA3
nTPM: 25.4
1867 Male, age 76, both hemispheres 32.8
2137 Male, age 80, left hemisphere 28.1
1891 Female, age 85, both hemispheres 27.3
2436 Male, age 74, both hemispheres 25.4
2620 Female, age 94, left hemisphere 21.1
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 22.1
1850 Male, age 80, both hemispheres 26.9
1990 Female, age 91, right hemisphere 25.8
2250 Female, age 67, right hemisphere 25.6
2018 Male, age 76, both hemispheres 25.1
1933 Female, age 85, both hemispheres 24.9
2532 Female, age 72, left hemisphere 21.1
2245 Female, age 91, both hemispheres 20.7
2693 Female, age 94, both hemispheres 19.9
2692 Male, age 74, both hemispheres 18.1
2622 Female, age 67, right hemisphere 13.0
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 30.2
1841 Female, age 85, right hemisphere 28.7
1794 Male, age 80, right hemisphere 27.6
2521 Female, age 94, right hemisphere 27.3
2848 Male, age 76, right hemisphere 21.5
Subiculum
nTPM: 23.6
1977 Female, age 85, both hemispheres 27.6
2042 Male, age 76, both hemispheres 27.2
1901 Male, age 80, both hemispheres 24.9
2729 Female, age 91, right hemisphere 22.0
2619 Male, age 74, both hemispheres 20.8
2438 Female, age 94, left hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 53.9
Min nTPM: 15.1
Std nTPM: 5.3
Median nTPM: 27.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 45.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 43.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 40.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 37.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.6
FF:10169-103B7 60 years, female 45.6
FF:10153-102I9 76 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.9
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.4
Sample A Female 29.9
Sample B Female 24.6
Sample C Male 21.4
Sample D Male 21.6
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 37.8
Min nTPM: 20.5
Sample A Female 37.8
Sample B Female 27.5
Sample C Male 33.8
Sample D Male 20.5
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 33.4
Min nTPM: 18.9
Sample A Female 21.5
Sample B Female 33.4
Sample C Male 24.3
Sample D Male 18.9
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.1
Sample A Female 26.9
Sample B Female 22.5
Sample C Male 22.1
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 66.0
Min nTPM: 48.5
Sample A Male 55.0
Sample B Male 66.0
Sample C Female 60.7
Sample D Female 48.5
Hippocampal formation
nTPM: 64.7
Samples: 4

Max nTPM: 68.7
Min nTPM: 59.0
Sample A Male 68.7
Sample B Male 59.0
Sample C Female 65.8
Sample D Female 65.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68269064 Antisense, RP_041208_01_H03, Mouse strain C57BL/6J (56 days, male) 5.3

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