We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.3
nTPM
Monaco:
160.1
nTPM
Schmiedel:
164.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.3
HPA sample
nTPM
gdT-cell nTPM: 75.1
Samples: 6
Max nTPM: 85.0
Min nTPM: 57.9
P10809_1007
57.9
P10809_1022
79.6
P10809_1041
74.9
P10809_1060
79.8
P10809_1077
85.0
P10809_1098
73.6
MAIT T-cell nTPM: 88.5
Samples: 6
Max nTPM: 104.7
Min nTPM: 69.5
P10809_1006
69.5
P10809_1024
104.7
P10809_1043
84.5
P10809_1062
81.6
P10809_1083
89.2
P10809_1097
101.5
Memory CD4 T-cell nTPM: 94.3
Samples: 6
Max nTPM: 103.8
Min nTPM: 85.0
P10809_1014
88.8
P10809_1026
101.9
P10809_1045
95.8
P10809_1064
85.0
P10809_1086
103.8
P10809_1113
90.5
Memory CD8 T-cell nTPM: 83.4
Samples: 5
Max nTPM: 97.1
Min nTPM: 73.9
P10809_1012
79.2
P10809_1027
97.1
P10809_1046
73.9
P10809_1065
91.6
P10809_1111
75.3
Naive CD4 T-cell nTPM: 98.7
Samples: 6
Max nTPM: 111.0
Min nTPM: 90.9
P10809_1015
102.0
P10809_1030
90.9
P10809_1049
111.0
P10809_1068
97.9
P10809_1085
99.0
P10809_1112
91.4
Naive CD8 T-cell nTPM: 81.7
Samples: 6
Max nTPM: 88.0
Min nTPM: 70.2
P10809_1016
79.8
P10809_1031
70.2
P10809_1050
88.0
P10809_1069
80.8
P10809_1087
85.6
P10809_1110
85.7
T-reg nTPM: 124.4
Samples: 6
Max nTPM: 148.6
Min nTPM: 91.1
P10809_1018
91.1
P10809_1037
148.6
P10809_1056
115.2
P10809_1075
115.0
P10809_1094
141.2
P10809_1106
135.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.0
Samples: 4
Max nTPM: 149.3
Min nTPM: 91.0
RHH5202_R3573
139.4
RHH5230_R3602
92.2
RHH5259_R3631
91.0
RHH5288_R3660
149.3
Effector memory CD8 T-cell nTPM: 145.8
Samples: 4
Max nTPM: 208.2
Min nTPM: 113.0
RHH5203_R3574
208.2
RHH5231_R3603
125.8
RHH5260_R3632
113.0
RHH5289_R3661
136.1
MAIT T-cell nTPM: 124.2
Samples: 4
Max nTPM: 133.7
Min nTPM: 110.2
RHH5233_R3605
131.5
RHH5205_R3576
110.2
RHH5262_R3634
121.3
RHH5297_R3663
133.7
Memory CD4 T-cell TFH nTPM: 143.8
Samples: 4
Max nTPM: 178.3
Min nTPM: 123.0
RHH5300_R3666
139.3
RHH5236_R3608
123.0
RHH5265_R3637
134.4
RHH5208_R3579
178.3
Memory CD4 T-cell Th1 nTPM: 121.4
Samples: 4
Max nTPM: 152.6
Min nTPM: 75.0
RHH5210_R3581
124.6
RHH5302_R3668
152.6
RHH5238_R3610
75.0
RHH5267_R3639
133.3
Memory CD4 T-cell Th1/Th17 nTPM: 120.1
Samples: 4
Max nTPM: 168.0
Min nTPM: 71.8
RHH5303_R3669
168.0
RHH5211_R3582
135.8
RHH5239_R3611
71.8
RHH5268_R3640
104.9
Memory CD4 T-cell Th17 nTPM: 115.9
Samples: 4
Max nTPM: 152.7
Min nTPM: 95.2
RHH5304_R3670
111.1
RHH5212_R3583
152.7
RHH5240_R3612
104.4
RHH5269_R3641
95.2
Memory CD4 T-cell Th2 nTPM: 140.2
Samples: 4
Max nTPM: 164.7
Min nTPM: 117.8
RHH5305_R3671
164.7
RHH5213_R3584
144.1
RHH5241_R3613
134.0
RHH5270_R3642
117.8
Naive CD4 T-cell nTPM: 125.6
Samples: 4
Max nTPM: 140.2
Min nTPM: 94.1
RHH5306_R3672
133.7
RHH5214_R3585
134.5
RHH5242_R3614
94.1
RHH5271_R3643
140.2
Naive CD8 T-cell nTPM: 127.4
Samples: 4
Max nTPM: 158.3
Min nTPM: 69.8
RHH5201_R3572
157.2
RHH5229_R3601
69.8
RHH5258_R3630
158.3
RHH5287_R3659
124.1
Non-Vd2 gdTCR nTPM: 118.7
Samples: 4
Max nTPM: 152.1
Min nTPM: 83.4
RHH5235_R3607
83.4
RHH5264_R3636
152.1
RHH5207_R3578
133.5
RHH5299_R3665
105.6
T-reg nTPM: 160.0
Samples: 4
Max nTPM: 190.9
Min nTPM: 139.4
RHH5301_R3667
163.1
RHH5237_R3609
190.9
RHH5266_R3638
139.4
RHH5209_R3580
146.7
Terminal effector memory CD4 T-cell nTPM: 103.9
Samples: 2
Max nTPM: 120.7
Min nTPM: 87.0
RHH5243_R3615
87.0
RHH5272_R3644
120.7
Terminal effector memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 155.1
Min nTPM: 96.2
RHH5232_R3604
111.4
RHH5204_R3575
155.1
RHH5261_R3633
96.2
RHH5296_R3662
135.3
Vd2 gdTCR nTPM: 109.6
Samples: 4
Max nTPM: 128.3
Min nTPM: 84.9
RHH5234_R3606
84.9
RHH5206_R3577
128.3
RHH5263_R3635
116.2
RHH5298_R3664
109.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
