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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
150.3
nTPM
FANTOM5:
310.0
Scaled Tags Per Million
Allen mouse:
0.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
150.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 138.7
1984
Male, age 76, both hemispheres
151.5
2188
Female, age 91, both hemispheres
135.1
2301
Female, age 85, both hemispheres
134.1
2090
Male, age 80, both hemispheres
134.0
Dorsal cochlear nucleus nTPM: 118.8
2187
Female, age 91, both hemispheres
143.6
2058
Male, age 76, both hemispheres
130.0
2802
Male, age 74, right hemisphere
127.6
2378
Male, age 80, both hemispheres
100.3
2370
Male, age 61, both hemispheres
92.5
Dorsal tegmental nucleus nTPM: 145.7
2358
Male, age 61, both hemispheres
190.5
2083
Male, age 80, both hemispheres
141.9
2326
Male, age 74, both hemispheres
128.6
1936
Male, age 76, left hemisphere
121.6
Dorsolateral tegmental area nTPM: 119.9
2141
Male, age 76, both hemispheres
141.9
2654
Male, age 80, both hemispheres
121.6
2337
Male, age 61, both hemispheres
118.0
2360
Male, age 74, both hemispheres
113.0
2751
Female, age 85, both hemispheres
104.8
Kolliker-Fuse nucleus nTPM: 137.0
2793
Female, age 91, left hemisphere
142.0
2315
Male, age 76, right hemisphere
139.2
2163
Male, age 80, both hemispheres
129.8
Lateral lemniscal nuclei nTPM: 122.0
2453
Male, age 74, right hemisphere
154.9
2169
Male, age 76, both hemispheres
144.2
2746
Female, age 85, left hemisphere
116.6
2320
Female, age 91, left hemisphere
107.3
2036
Male, age 80, both hemispheres
87.2
Lateral parabrachial nucleus nTPM: 119.2
2792
Male, age 76, both hemispheres
142.4
2139
Female, age 85, right hemisphere
141.1
2013
Male, age 80, both hemispheres
115.5
2790
Male, age 61, both hemispheres
77.7
Lateral vestibular nucleus nTPM: 138.9
2311
Male, age 80, both hemispheres
144.9
2184
Male, age 76, both hemispheres
132.8
Locus coeruleus nTPM: 150.3
2720
Male, age 74, both hemispheres
203.9
2123
Female, age 91, both hemispheres
165.3
2162
Male, age 80, both hemispheres
163.8
2014
Male, age 55, unknown
141.7
2788
Male, age 74, unknown
127.7
2317
Female, age 72, unknown
126.7
1980
Male, age 76, both hemispheres
123.4
Medial parabrachial nucleus nTPM: 122.9
2854
Male, age 80, both hemispheres
147.2
2170
Female, age 91, both hemispheres
129.9
2786
Male, age 76, both hemispheres
126.2
2463
Female, age 85, right hemisphere
121.6
2156
Male, age 61, both hemispheres
89.8
Medial periolivary nuclei nTPM: 120.8
2063
Male, age 76, both hemispheres
147.5
2171
Female, age 85, both hemispheres
127.9
2458
Female, age 91, both hemispheres
113.0
2081
Male, age 80, both hemispheres
107.8
2791
Male, age 74, right hemisphere
107.6
Motor facial nucleus nTPM: 133.1
2697
Female, age 85, both hemispheres
152.1
2365
Male, age 74, right hemisphere
145.1
2327
Male, age 80, both hemispheres
141.7
2062
Male, age 76, both hemispheres
137.7
2126
Male, age 61, both hemispheres
117.5
2795
Female, age 91, both hemispheres
104.2
Motor trigeminal nucleus nTPM: 125.9
2079
Male, age 80, both hemispheres
135.4
2335
Male, age 61, both hemispheres
128.0
2309
Male, age 76, both hemispheres
127.1
2560
Male, age 74, both hemispheres
120.1
2321
Female, age 91, both hemispheres
118.7
Nuclei of the trapezoid body nTPM: 121.3
1983
Male, age 76, both hemispheres
177.3
2166
Male, age 80, both hemispheres
128.5
2735
Female, age 85, both hemispheres
118.2
2159
Male, age 61, both hemispheres
98.2
2368
Female, age 91, both hemispheres
84.3
Nucleus raphe magnus nTPM: 140.9
2051
Male, age 76, both hemispheres
170.6
2172
Female, age 85, both hemispheres
163.6
2455
Male, age 74, both hemispheres
160.9
2328
Male, age 80, both hemispheres
143.5
2459
Female, age 91, both hemispheres
107.9
2160
Male, age 61, both hemispheres
98.9
Paramedian reticular nucleus nTPM: 111.6
2050
Female, age 85, both hemispheres
118.3
2052
Male, age 76, both hemispheres
117.6
2057
Male, age 80, both hemispheres
107.5
2313
Male, age 61, both hemispheres
103.1
Pedunculopontine tegmental nucleus nTPM: 131.3
2338
Male, age 61, both hemispheres
145.7
2334
Male, age 80, both hemispheres
124.5
1921
Female, age 85, both hemispheres
123.7
Pontine nuclei nTPM: 123.5
2787
Female, age 85, both hemispheres
155.3
1968
Male, age 76, left hemisphere
148.1
2454
Male, age 74, left hemisphere
136.1
2109
Female, age 72, unknown
128.6
1863
Male, age 55, unknown
121.9
2115
Male, age 80, left hemisphere
112.1
2319
Female, age 91, both hemispheres
105.7
2727
Male, age 61, right hemisphere
80.3
Pontine raphe nucleus nTPM: 128.4
2122
Female, age 85, midline
133.3
2853
Male, age 76, midline
123.6
Posteroventral cochlear nucleus nTPM: 115.6
2070
Male, age 76, both hemispheres
157.3
2752
Female, age 85, both hemispheres
135.3
2135
Female, age 91, both hemispheres
107.9
2341
Male, age 80, both hemispheres
100.9
2371
Male, age 61, both hemispheres
76.4
Principal sensory trigeminal nucleus nTPM: 110.6
2324
Male, age 76, both hemispheres
138.5
2367
Female, age 91, left hemisphere
114.7
2008
Male, age 80, left hemisphere
108.3
2158
Male, age 61, both hemispheres
81.1
Reticular pontine nucleus, caudal nTPM: 140.7
2092
Male, age 76, both hemispheres
165.6
2332
Male, age 80, right hemisphere
150.9
2457
Female, age 91, both hemispheres
129.6
2559
Male, age 74, both hemispheres
116.8
Reticular pontine nucleus, oral nTPM: 127.8
2167
Male, age 76, both hemispheres
152.4
2366
Female, age 91, both hemispheres
145.7
2361
Male, age 74, both hemispheres
135.8
1939
Male, age 80, both hemispheres
103.4
2012
Female, age 85, both hemispheres
101.9
Reticulotegmental nucleus nTPM: 126.4
2322
Female, age 91, both hemispheres
142.7
2452
Male, age 74, both hemispheres
132.8
2333
Male, age 80, both hemispheres
124.5
2325
Male, age 76, both hemispheres
105.5
Spinal trigeminal nucleus, oral nTPM: 139.8
1978
Male, age 76, both hemispheres
151.3
2164
Male, age 80, both hemispheres
148.5
2737
Female, age 85, both hemispheres
119.4
Subcoeruleus area nTPM: 120.9
2323
Female, age 91, left hemisphere
136.5
1958
Male, age 80, both hemispheres
130.8
2089
Male, age 76, left hemisphere
125.4
2451
Male, age 74, both hemispheres
113.8
2369
Female, age 85, left hemisphere
97.8
Superior olive nTPM: 118.2
2020
Male, age 76, both hemispheres
134.9
2364
Male, age 74, right hemisphere
123.3
1875
Female, age 85, both hemispheres
113.3
2329
Male, age 80, right hemisphere
112.9
2561
Female, age 91, both hemispheres
106.8
Ventral periolivary nuclei nTPM: 126.0
2165
Male, age 80, both hemispheres
151.4
2130
Female, age 85, both hemispheres
134.2
2023
Male, age 76, both hemispheres
120.7
2794
Female, age 91, left hemisphere
97.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 124.7
2449
Male, age 74, both hemispheres
158.2
1959
Male, age 76, both hemispheres
139.6
2840
Female, age 85, both hemispheres
134.0
2161
Male, age 80, both hemispheres
133.8
2359
Male, age 61, both hemispheres
98.6
2456
Female, age 91, both hemispheres
83.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
