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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
101.4
nTPM
Monaco:
144.0
nTPM
Schmiedel:
77.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.4
HPA sample
nTPM
gdT-cell nTPM: 69.4
Samples: 6
Max nTPM: 86.2
Min nTPM: 55.7
P10809_1007
55.7
P10809_1022
86.2
P10809_1041
70.3
P10809_1060
58.0
P10809_1077
79.2
P10809_1098
67.2
MAIT T-cell nTPM: 70.9
Samples: 6
Max nTPM: 79.2
Min nTPM: 60.2
P10809_1006
77.1
P10809_1024
77.1
P10809_1043
63.7
P10809_1062
68.0
P10809_1083
79.2
P10809_1097
60.2
Memory CD4 T-cell nTPM: 68.9
Samples: 6
Max nTPM: 82.9
Min nTPM: 57.5
P10809_1014
70.6
P10809_1026
60.4
P10809_1045
82.9
P10809_1064
57.5
P10809_1086
78.8
P10809_1113
63.4
Memory CD8 T-cell nTPM: 75.5
Samples: 5
Max nTPM: 95.1
Min nTPM: 59.5
P10809_1012
77.8
P10809_1027
95.1
P10809_1046
73.8
P10809_1065
59.5
P10809_1111
71.4
Naive CD4 T-cell nTPM: 71.6
Samples: 6
Max nTPM: 86.7
Min nTPM: 58.4
P10809_1015
70.1
P10809_1030
86.7
P10809_1049
69.3
P10809_1068
58.4
P10809_1085
74.7
P10809_1112
70.1
Naive CD8 T-cell nTPM: 70.4
Samples: 6
Max nTPM: 84.0
Min nTPM: 56.9
P10809_1016
56.9
P10809_1031
79.1
P10809_1050
62.4
P10809_1069
74.5
P10809_1087
84.0
P10809_1110
65.2
T-reg nTPM: 101.4
Samples: 6
Max nTPM: 128.3
Min nTPM: 84.8
P10809_1018
90.1
P10809_1037
101.8
P10809_1056
107.6
P10809_1075
84.8
P10809_1094
128.3
P10809_1106
95.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.2
Samples: 4
Max nTPM: 87.3
Min nTPM: 78.3
RHH5202_R3573
87.3
RHH5230_R3602
78.3
RHH5259_R3631
80.4
RHH5288_R3660
78.7
Effector memory CD8 T-cell nTPM: 144.1
Samples: 4
Max nTPM: 185.6
Min nTPM: 117.1
RHH5203_R3574
185.6
RHH5231_R3603
117.1
RHH5260_R3632
124.7
RHH5289_R3661
148.8
MAIT T-cell nTPM: 104.7
Samples: 4
Max nTPM: 141.2
Min nTPM: 75.2
RHH5233_R3605
86.4
RHH5205_R3576
141.2
RHH5262_R3634
115.8
RHH5297_R3663
75.2
Memory CD4 T-cell TFH nTPM: 89.8
Samples: 4
Max nTPM: 98.8
Min nTPM: 83.8
RHH5300_R3666
88.4
RHH5236_R3608
83.8
RHH5265_R3637
88.1
RHH5208_R3579
98.8
Memory CD4 T-cell Th1 nTPM: 92.2
Samples: 4
Max nTPM: 108.1
Min nTPM: 75.0
RHH5210_R3581
106.0
RHH5302_R3668
79.8
RHH5238_R3610
75.0
RHH5267_R3639
108.1
Memory CD4 T-cell Th1/Th17 nTPM: 88.5
Samples: 4
Max nTPM: 115.2
Min nTPM: 64.5
RHH5303_R3669
78.2
RHH5211_R3582
115.2
RHH5239_R3611
64.5
RHH5268_R3640
96.1
Memory CD4 T-cell Th17 nTPM: 102.8
Samples: 4
Max nTPM: 112.2
Min nTPM: 97.4
RHH5304_R3670
102.8
RHH5212_R3583
98.8
RHH5240_R3612
112.2
RHH5269_R3641
97.4
Memory CD4 T-cell Th2 nTPM: 94.8
Samples: 4
Max nTPM: 142.7
Min nTPM: 73.6
RHH5305_R3671
78.9
RHH5213_R3584
142.7
RHH5241_R3613
73.6
RHH5270_R3642
84.0
Naive CD4 T-cell nTPM: 78.9
Samples: 4
Max nTPM: 97.2
Min nTPM: 69.0
RHH5306_R3672
75.0
RHH5214_R3585
97.2
RHH5242_R3614
69.0
RHH5271_R3643
74.4
Naive CD8 T-cell nTPM: 67.6
Samples: 4
Max nTPM: 82.3
Min nTPM: 42.4
RHH5201_R3572
82.3
RHH5229_R3601
42.4
RHH5258_R3630
70.3
RHH5287_R3659
75.3
Non-Vd2 gdTCR nTPM: 116.9
Samples: 4
Max nTPM: 139.3
Min nTPM: 92.3
RHH5235_R3607
99.3
RHH5264_R3636
136.6
RHH5207_R3578
139.3
RHH5299_R3665
92.3
T-reg nTPM: 113.4
Samples: 4
Max nTPM: 152.3
Min nTPM: 86.1
RHH5301_R3667
86.1
RHH5237_R3609
93.7
RHH5266_R3638
121.5
RHH5209_R3580
152.3
Terminal effector memory CD4 T-cell nTPM: 85.9
Samples: 2
Max nTPM: 93.5
Min nTPM: 78.3
RHH5243_R3615
93.5
RHH5272_R3644
78.3
Terminal effector memory CD8 T-cell nTPM: 104.7
Samples: 4
Max nTPM: 111.2
Min nTPM: 101.3
RHH5232_R3604
101.3
RHH5204_R3575
102.2
RHH5261_R3633
104.1
RHH5296_R3662
111.2
Vd2 gdTCR nTPM: 114.6
Samples: 4
Max nTPM: 132.6
Min nTPM: 75.7
RHH5234_R3606
122.6
RHH5206_R3577
132.6
RHH5263_R3635
127.6
RHH5298_R3664
75.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
